RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 PRAMEF33A0A0G2JMD5 474 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 A0A1W2PP18 115 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 FFAR3O14843 346 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 GPR42O15529 346 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 CLDN9O95484 217 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 TPP2P29144 1249 aaPredicted RBP14.48□□□□□ -0.09
CALD1-206ENST00000424922 HMOX2P30519 316 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 TMED1Q13445 227 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 RCAN2Q14206 197 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 PDK3Q15120 406 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 VPS26BQ4G0F5 336 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 IL23RQ5VWK5 629 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 ABRAXAS1Q6UWZ7 409 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 DHFR2Q86XF0 187 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 DCP2Q8IU60 420 aaKnown RBP14.48□□□□□ -0.09
CALD1-206ENST00000424922 KLHDC8AQ8IYD2 350 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 LRRC56Q8IYG6 542 aaPredicted RBP14.48□□□□□ -0.09
CALD1-206ENST00000424922 ST13P4Q8IZP2 240 aaPredicted RBP14.48□□□□□ -0.09
CALD1-206ENST00000424922 B4GALNT2Q8NHY0 566 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 DUSP15Q9H1R2 295 aaPredicted RBP14.48□□□□□ -0.09
CALD1-206ENST00000424922 MUC13Q9H3R2 512 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 TMEM131Q92545 1883 aa14.48□□□□□ -0.09
CALD1-206ENST00000424922 DYTNA2CJ06 578 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 AQP12BA6NM10 295 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 FXYD1O00168 92 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 TLR4O00206 839 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 PRAMEF4O60810 478 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 DNAJA2O60884 412 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 MTHFD1P11586 935 aaKnown RBP14.47□□□□□ -0.09
CALD1-206ENST00000424922 TDGF1P13385 188 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 CHN2P52757 468 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 CPSF6Q16630 551 aaKnown RBP eCLIP14.47□□□□□ -0.09
CALD1-206ENST00000424922 PRAMEF9Q5VWM5 478 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 UGT2A3Q6UWM9 527 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 WASH2PQ6VEQ5 465 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 RNF165Q6ZSG1 346 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 AQP12AQ8IXF9 295 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 SLC15A3Q8IY34 581 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 PHACTR4Q8IZ21 702 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 C1orf216Q8TAB5 229 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 GPBAR1Q8TDU6 330 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 CAMK1GQ96NX5 476 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 MENTQ9BUN1 341 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 WASH6PQ9NQA3 447 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 TRPS1Q9UHF7 1281 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 CACNA1EQ15878 2313 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 TNRC6BQ9UPQ9 1833 aaKnown RBP14.47□□□□□ -0.09
CALD1-206ENST00000424922 TRBV23OR9-2A0A075B6M9 112 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 E7EQ34 232 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 NME4O00746 187 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 EEDO75530 441 aaKnown RBP14.47□□□□□ -0.09
CALD1-206ENST00000424922 NPPAP01160 153 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 CELA2BP08218 269 aaPredicted RBP14.47□□□□□ -0.09
CALD1-206ENST00000424922 CTSEP14091 401 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 NPPBP16860 134 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 HTR6P50406 440 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 DIO3P55073 304 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 KCNK10P57789 538 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 CSTF1Q05048 431 aaKnown RBP14.47□□□□□ -0.09
CALD1-206ENST00000424922 CHIT1Q13231 466 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 IL27RAQ6UWB1 636 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 IQCHQ86VS3 1027 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 C1orf210Q8IVY1 113 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 SLCO4A1Q96BD0 722 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 LRRC58Q96CX6 371 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 HBEGFQ99075 208 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 SGPP1Q9BX95 441 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 MVB12BQ9H7P6 319 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 CCDC177Q9NQR7 707 aaPredicted RBP14.47□□□□□ -0.09
CALD1-206ENST00000424922 ARMC1Q9NVT9 282 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 PCOLCE2Q9UKZ9 415 aa14.47□□□□□ -0.09
CALD1-206ENST00000424922 ERGP11308 486 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 F3P13726 295 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 JUNDP17535 347 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 ZFP36L2P47974 494 aaKnown RBP14.46□□□□□ -0.09
CALD1-206ENST00000424922 BLKP51451 505 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 ATXN3P54252 364 aaPredicted RBP14.46□□□□□ -0.09
CALD1-206ENST00000424922 IRF8Q02556 426 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 SRSF5Q13243 272 aaKnown RBP14.46□□□□□ -0.09
CALD1-206ENST00000424922 C1orf61Q13536 156 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 ARHGAP19Q14CB8 494 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 TLR1Q15399 786 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 XKR6Q5GH73 641 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 THEMIS2Q5TEJ8 643 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 LPCAT2Q7L5N7 544 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 WDR5BQ86VZ2 330 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.46□□□□□ -0.09
CALD1-206ENST00000424922 MAML2Q8IZL2 1156 aaPredicted RBP14.46□□□□□ -0.09
CALD1-206ENST00000424922 DNASE2BQ8WZ79 361 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 NEIL2Q969S2 332 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 DTNBP1Q96EV8 351 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 GSDMCQ9BYG8 508 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 APOBEC3BQ9UH17 382 aaKnown RBP14.46□□□□□ -0.09
CALD1-206ENST00000424922 LEF1Q9UJU2 399 aaPredicted RBP14.46□□□□□ -0.09
CALD1-206ENST00000424922 PCDHA9Q9Y5H5 950 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 HEBP2Q9Y5Z4 205 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 KCNE2Q9Y6J6 123 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 LAMA1P25391 3075 aa14.46□□□□□ -0.09
CALD1-206ENST00000424922 CABIN1Q9Y6J0 2220 aa14.45□□□□□ -0.1
CALD1-206ENST00000424922 FAM234BA2RU67 622 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms