RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ZNF572Q7Z3I7 529 aaPredicted RBP15.67■□□□□ 0.1
LINC00404-201ENST00000418660 NKAPQ8N5F7 415 aaKnown RBP15.67■□□□□ 0.1
LINC00404-201ENST00000418660 OR56A3Q8NH54 315 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 ATL1Q8WXF7 558 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 ANKRD7Q92527 254 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 ALKBH8Q96BT7 664 aaKnown RBP15.67■□□□□ 0.1
LINC00404-201ENST00000418660 FBXL8Q96CD0 374 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 VPS50Q96JG6 964 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 HAUS8Q9BT25 410 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 MCMBPQ9BTE3 642 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 CRB3Q9BUF7 120 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 RHOJQ9H4E5 214 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 SAYSD1Q9NPB0 183 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 FBXL4Q9UKA2 621 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 NOVA2Q9UNW9 492 aaKnown RBP15.67■□□□□ 0.1
LINC00404-201ENST00000418660 SH2B3Q9UQQ2 575 aa15.67■□□□□ 0.1
LINC00404-201ENST00000418660 UTP11Q9Y3A2 253 aaKnown RBP15.67■□□□□ 0.1
LINC00404-201ENST00000418660 MED13Q9UHV7 2174 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 MASP2O00187 686 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 FOXS1O43638 330 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 ALPPP05187 535 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 ANXA5P08758 320 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 SSTR1P30872 391 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 MLLT10P55197 1068 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 TAS2R39P59534 338 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 CAV1Q03135 178 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 KLC1Q07866 573 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 TUBB8Q3ZCM7 444 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 VWA2Q5GFL6 755 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 SBSNQ6UWP8 590 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 CAPN12Q6ZSI9 719 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 CYS1Q717R9 158 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 VN1R4Q7Z5H5 301 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 CDKL2Q92772 493 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 MMABQ96EY8 250 aaPredicted RBP15.66■□□□□ 0.1
LINC00404-201ENST00000418660 VPS39Q96JC1 886 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 YIPF2Q9BWQ6 316 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 DRC3Q9H069 523 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 RAB17Q9H0T7 212 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 ZNF552Q9H707 407 aaPredicted RBP15.66■□□□□ 0.1
LINC00404-201ENST00000418660 SMYD2Q9NRG4 433 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 TRPC4Q9UBN4 977 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 IKZF3Q9UKT9 509 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 TENM4Q6N022 2769 aa15.66■□□□□ 0.1
LINC00404-201ENST00000418660 TNRC6AQ8NDV7 1962 aaKnown RBP15.66■□□□□ 0.1
LINC00404-201ENST00000418660 CCDC88CQ9P219 2028 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 A0A0A6YYC8 382 aaPredicted RBP15.65■□□□□ 0.1
LINC00404-201ENST00000418660 TTLL8A6PVC2 850 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 I3L1I5 382 aaPredicted RBP15.65■□□□□ 0.1
LINC00404-201ENST00000418660 IPO13O94829 963 aaKnown RBP15.65■□□□□ 0.1
LINC00404-201ENST00000418660 GUCA1CO95843 209 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 GSTA2P09210 222 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 CDH1P12830 882 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 GRK3P35626 688 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 PLTPP55058 493 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 JMJD6Q6NYC1 403 aaPredicted RBP15.65■□□□□ 0.1
LINC00404-201ENST00000418660 LAPTM4BQ86VI4 370 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 PRSS58Q8IYP2 241 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 RBMXL3Q8N7X1 1067 aaKnown RBP15.65■□□□□ 0.1
LINC00404-201ENST00000418660 AMER3Q8N944 861 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 ABHD11Q8NFV4 315 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 OR11G2Q8NGC1 345 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 MIB2Q96AX9 1013 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 PYCR2Q96C36 320 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 TM4SF19Q96DZ7 209 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 FAM129AQ9BZQ8 928 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 PHACTR1Q9C0D0 580 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 TGIF2Q9GZN2 237 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 POPDC3Q9HBV1 291 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 MKKSQ9NPJ1 570 aaPredicted RBP15.65■□□□□ 0.1
LINC00404-201ENST00000418660 C14orf105Q9NVL8 296 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 C3orf18Q9UK00 162 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 PLAAQ9Y263 795 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 MAP4K5Q9Y4K4 846 aa15.65■□□□□ 0.1
LINC00404-201ENST00000418660 FEZF1A0PJY2 475 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 CDC7O00311 574 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 LCMT2O60294 686 aaKnown RBP15.64■□□□□ 0.09
LINC00404-201ENST00000418660 SORBS2O94875 1100 aaKnown RBP15.64■□□□□ 0.09
LINC00404-201ENST00000418660 ITGA3P26006 1051 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 AVPR1BP47901 424 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 CD97P48960 835 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 CCR8P51685 355 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 EMP2P54851 167 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 POU4F1Q01851 419 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 ZNF460Q14592 562 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 PPP1R3AQ16821 1122 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 IGFL3Q6UXB1 125 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 C3orf62Q6ZUJ4 267 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 CEP97Q8IW35 865 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 CAMKVQ8NCB2 501 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 OR4K1Q8NGD4 311 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 OR4K3Q96R72 315 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 MFRPQ9BY79 579 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 GPAMQ9HCL2 828 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 TXNDC16Q9P2K2 825 aa15.64■□□□□ 0.09
LINC00404-201ENST00000418660 MRPS2Q9Y399 296 aaKnown RBP15.64■□□□□ 0.09
LINC00404-201ENST00000418660 HEATR5BQ9P2D3 2071 aa15.63■□□□□ 0.09
LINC00404-201ENST00000418660 TCRBV9S1A1TA0A576 114 aa15.63■□□□□ 0.09
LINC00404-201ENST00000418660 FAM159BA6NKW6 160 aa15.63■□□□□ 0.09
LINC00404-201ENST00000418660 CXorf49A8MYA2 514 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms