RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SH2B3Q9UQQ2 575 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 DMTF1Q9Y222 760 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 MRPS17Q9Y2R5 130 aaKnown RBP16.17■□□□□ 0.18
SSBP3-205ENST00000417664 PCM1Q15154 2024 aa16.17■□□□□ 0.18
SSBP3-205ENST00000417664 ATP6V1C1P21283 382 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 CD72P21854 359 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 TIA1P31483 386 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■■■■■ 29.2
SSBP3-205ENST00000417664 TRPC1P48995 793 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 RGS19P49795 217 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 CLDN2P57739 230 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 MAP7Q14244 749 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 CLCA4Q14CN2 919 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 CAMKMTQ7Z624 323 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 TMEM132CQ8N3T6 1108 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 C1orf52Q8N6N3 182 aaKnown RBP16.16■□□□□ 0.18
SSBP3-205ENST00000417664 OR4K1Q8NGD4 311 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 NAF1Q96HR8 494 aaKnown RBP16.16■□□□□ 0.18
SSBP3-205ENST00000417664 PPM1MQ96MI6 270 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 PRM3Q9NNZ6 103 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 AHSPQ9NZD4 102 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 VAPAQ9P0L0 249 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 EBF1Q9UH73 591 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 PCDHB3Q9Y5E6 796 aa16.16■□□□□ 0.18
SSBP3-205ENST00000417664 TRBV5-3A0A0A0MS03 114 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 A0A1W2PPV9 198 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 PRAMEF26H0Y7S4 382 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 ETHE1O95571 254 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 ANXA4P09525 319 aaPredicted RBP16.15■□□□□ 0.18
SSBP3-205ENST00000417664 UMPSP11172 480 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 MTHFD1P11586 935 aaKnown RBP16.15■□□□□ 0.18
SSBP3-205ENST00000417664 PKLRP30613 574 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 RPL3P39023 403 aaKnown RBP16.15■□□□□ 0.18
SSBP3-205ENST00000417664 RABIFP47224 123 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 ATXN3P54252 364 aaPredicted RBP16.15■□□□□ 0.18
SSBP3-205ENST00000417664 CCDC85BQ15834 202 aaPredicted RBP16.15■□□□□ 0.18
SSBP3-205ENST00000417664 RPE65Q16518 533 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 PUS10Q3MIT2 529 aaKnown RBP16.15■□□□□ 0.18
SSBP3-205ENST00000417664 RUNDC3AQ59EK9 446 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 ICE2Q659A1 982 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 GCNT7Q6ZNI0 430 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 PGBD3Q8N328 593 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 TMEM145Q8NBT3 493 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 FAM174AQ8TBP5 190 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 OR1E3Q8WZA6 343 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 POP5Q969H6 163 aaKnown RBP16.15■□□□□ 0.18
SSBP3-205ENST00000417664 EGLN2Q96KS0 407 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 ECSITQ9BQ95 431 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 KLHL4Q9C0H6 718 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 KIR3DX1Q9H7L2 352 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 CD93Q9NPY3 652 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 ARMC1Q9NVT9 282 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 TRNAU1APQ9NX07 287 aaKnown RBP16.15■□□□□ 0.18
SSBP3-205ENST00000417664 MAGEL2Q9UJ55 1249 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 PCDHB11Q9Y5F2 797 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 TNRC18O15417 2968 aaPredicted RBP16.15■□□□□ 0.18
SSBP3-205ENST00000417664 UNC80Q8N2C7 3258 aa16.15■□□□□ 0.18
SSBP3-205ENST00000417664 ANKDD1BA6NHY2 528 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 ARPC2O15144 300 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 SEMA3DO95025 777 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 GPIP06744 558 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 HPCAL1P37235 193 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 GRIA3P42263 894 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 PHC1P78364 1004 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 RAE1P78406 368 aaKnown RBP16.14■□□□□ 0.18
SSBP3-205ENST00000417664 ABATP80404 500 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 PRDX1Q06830 199 aaKnown RBP16.14■□□□□ 0.18
SSBP3-205ENST00000417664 TRIP10Q15642 601 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 PGS1Q32NB8 556 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 MTX3Q5HYI7 312 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 OGFRL1Q5TC84 451 aaPredicted RBP16.14■□□□□ 0.18
SSBP3-205ENST00000417664 CYP2R1Q6VVX0 501 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 ZNF687Q8N1G0 1237 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 METTL4Q8N3J2 472 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 VPS37AQ8NEZ2 397 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 GBP5Q96PP8 586 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 EBPLQ9BY08 206 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 PAIP1Q9H074 479 aaKnown RBP16.14■□□□□ 0.18
SSBP3-205ENST00000417664 SERHLQ9NQF3 203 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 CCM2LQ9NUG4 571 aaPredicted RBP16.14■□□□□ 0.18
SSBP3-205ENST00000417664 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.14■□□□□ 0.18
SSBP3-205ENST00000417664 RIMS3Q9UJD0 308 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 WBP11Q9Y2W2 641 aaKnown RBP16.14■□□□□ 0.18
SSBP3-205ENST00000417664 NEUROG3Q9Y4Z2 214 aa16.14■□□□□ 0.18
SSBP3-205ENST00000417664 SCAMP2O15127 329 aaKnown RBP16.14■□□□□ 0.17
SSBP3-205ENST00000417664 PCDH7O60245 1069 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 DFNA5O60443 496 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 ZNF217O75362 1048 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 CAPNS1P04632 268 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 COX7A2P14406 83 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 ATP6V1B2P21281 511 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 HRH2P25021 359 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 GSTM2P28161 218 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 YBX1P67809 324 aaKnown RBP16.14■□□□□ 0.17
SSBP3-205ENST00000417664 REEP5Q00765 189 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 ZNF763Q0D2J5 394 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 UGT8Q16880 541 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 ANXA8L1Q5VT79 327 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 KIAA0895LQ68EN5 471 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 DUS1LQ6P1R4 473 aaKnown RBP16.14■□□□□ 0.17
SSBP3-205ENST00000417664 ABI3BPQ7Z7G0 1075 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms