RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 GSTT2BP0CG30 244 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 SLC2A2P11168 524 aaPredicted RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 AKT2P31751 481 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 GNALP38405 381 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 AFF1P51825 1210 aaKnown RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 STC1P52823 247 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 RFTN1Q14699 578 aaPredicted RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 SMCO1Q147U7 214 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 CCL14Q16627 93 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 FAAH2Q6GMR7 532 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 TMEM220Q6QAJ8 160 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 PRSS55Q6UWB4 352 aaPredicted RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 PHC2Q8IXK0 858 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF420Q8TAQ5 688 aaPredicted RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 DPF3Q92784 378 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 PMEPA1Q969W9 287 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 KIAA1191Q96A73 305 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 TEPSINQ96N21 525 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 GMLQ99445 158 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 CDADC1Q9BWV3 514 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 ADAP2Q9NPF8 381 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 PAK1IP1Q9NWT1 392 aaPredicted RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 THUMPD1Q9NXG2 353 aaKnown RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 COQ3Q9NZJ6 369 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 TMEM9Q9P0T7 183 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 PRSS51A0A1B0GVH4 220 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 MANSC4A6NHS7 340 aaPredicted RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 KRT33AO76009 404 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 PLEKHG6Q3KR16 790 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 MINDY4Q4G0A6 757 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 VARS2Q5ST30 1063 aaKnown RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 UBE2UQ5VVX9 321 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 FAM180BQ6P0A1 224 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 CCBE1Q6UXH8 406 aaPredicted RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 DCDC5Q6ZRR9 648 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 GOLGA7Q7Z5G4 137 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 CCDC36Q8IYA8 594 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 ARL14EPQ8N8R7 260 aaPredicted RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 PIGXQ8TBF5 258 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 ANKRD60Q9BZ19 345 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 SLC6A15Q9H2J7 730 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 R3HDMLQ9H3Y0 253 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 FAM118AQ9NWS6 357 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 CFL2Q9Y281 166 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 PCDHGB3Q9Y5G1 929 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 STATHP02808 62 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 CD1DP15813 335 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 TNFRSF1BP20333 461 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 HTR1BP28222 390 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 DPP6P42658 865 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 RORCP51449 518 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 RPL6Q02878 288 aaKnown RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 BLOC1S3Q6QNY0 202 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 ARL9Q6T311 187 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 ATCAYQ86WG3 371 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 FAM129CQ86XR2 697 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 GALNT12Q8IXK2 581 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 DTWD1Q8N5C7 304 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 ZFP90Q8TF47 636 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 RTP4Q96DX8 246 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 C12orf42Q96LP6 360 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 IFT27Q9BW83 186 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 NPLQ9BXD5 320 aaPredicted RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 NUSAP1Q9BXS6 441 aaKnown RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 RGS17Q9UGC6 210 aaPredicted RBP12.54□□□□□ -0.4
SCN1B-202ENST00000415950 RNF6Q9Y252 685 aa12.54□□□□□ -0.4
SCN1B-202ENST00000415950 A0A1B0GVM2 712 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 IRGMA1A4Y4 181 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 GABRB3P28472 473 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 STXBP1P61764 594 aaKnown RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 PCBP1Q15365 356 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 GLB1L3Q8NCI6 653 aaPredicted RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 LSM14AQ8ND56 463 aaKnown RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 UFD1Q92890 307 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 TIFAQ96CG3 184 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF597Q96LX8 424 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 SEZ6LQ9BYH1 1024 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 MOV10Q9HCE1 1003 aaKnown RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 CCDC177Q9NQR7 707 aaPredicted RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 OLAHQ9NV23 265 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 PRELID1Q9Y255 219 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 RUVBL1Q9Y265 456 aaKnown RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 PCDHGA8Q9Y5G5 932 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 PCDHGA11Q9Y5H2 935 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 C2orf92A0A1B0GVN3 265 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 DAPL1A0PJW8 107 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 M0R129 80 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 CLDN7O95471 211 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 OXSR1O95747 527 aaPredicted RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF806P0C7X5 589 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 HOXB6P17509 224 aaKnown RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 ARRB2P32121 409 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 ZSCAN5AQ9BUG6 496 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 TRMT61BQ9BVS5 477 aaKnown RBP12.53□□□□□ -0.4
SCN1B-202ENST00000415950 TAS2R7Q9NYW3 318 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 DNAJC27Q9NZQ0 273 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 FZD4Q9ULV1 537 aa12.53□□□□□ -0.4
SCN1B-202ENST00000415950 SH3D21A4FU49 640 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms