RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 VTCN1Q7Z7D3 282 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 KIAA1958Q8N8K9 716 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 ASB11Q8WXH4 323 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 WBP2Q969T9 261 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 APIPQ96GX9 242 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 HRASLS5Q96KN8 279 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 PANX1Q96RD7 426 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 CLSTN3Q9BQT9 956 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 GABARAPL3Q9BY60 117 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 MMP27Q9H306 513 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 SP140LQ9H930 580 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 CORO2BQ9UQ03 480 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 PPIL1Q9Y3C6 166 aa9.49□□□□□ -0.89
CD44-206ENST00000415148 SAMHD1Q9Y3Z3 626 aaKnown RBP9.49□□□□□ -0.89
CD44-206ENST00000415148 IGLV3-16A0A075B6K0 115 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 PABPN1LA6NDY0 278 aaKnown RBP9.48□□□□□ -0.89
CD44-206ENST00000415148 MAGEB17A8MXT2 336 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 TAF4O00268 1085 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 KPNA5O15131 536 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 SCN2BO60939 215 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 WBP4O75554 376 aaKnown RBP9.48□□□□□ -0.89
CD44-206ENST00000415148 EFEMP2O95967 443 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 JUPP14923 745 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 AOAHP28039 575 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 AP1S2P56377 157 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 TEKQ02763 1124 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 CREMQ03060 361 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 KCNC3Q14003 757 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 LRIT3Q3SXY7 679 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 LIPJQ5W064 366 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 FRG2Q64ET8 278 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 AHSA2Q719I0 299 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 PTOV1Q86YD1 416 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 FAM217AQ8IXS0 508 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 ADGRG2Q8IZP9 1017 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 APH1BQ8WW43 257 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 ELMO1Q92556 727 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 SLC38A4Q969I6 547 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 FRG2BQ96QU4 278 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 COPS8Q99627 209 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 ITPAQ9BY32 194 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 MARCH7Q9H992 704 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 CPNE5Q9HCH3 593 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 AMBNQ9NP70 447 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 KIF17Q9P2E2 1029 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 LRFN2Q9ULH4 789 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 ERVK-11Q9UQG0 969 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 PCDHGB3Q9Y5G1 929 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 NOX1Q9Y5S8 564 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 KRT87PA6NCN2 255 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 SAGE2PA6NJ88 616 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 GFYI3L273 518 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 K7ERQ8 282 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 SCAMP3O14828 347 aaKnown RBP9.48□□□□□ -0.89
CD44-206ENST00000415148 ADAM12O43184 909 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 IGSF6O95976 241 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 DNTTP04053 509 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 ABCB1P08183 1280 aaPredicted RBP9.48□□□□□ -0.89
CD44-206ENST00000415148 CD36P16671 472 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 SERPINA4P29622 427 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 C21orf33P30042 268 aaPredicted RBP9.48□□□□□ -0.89
CD44-206ENST00000415148 CCR7P32248 378 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 OR1D2P34982 312 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 WNT3P56703 355 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 RPP38P78345 283 aaKnown RBP9.48□□□□□ -0.89
CD44-206ENST00000415148 VLDLRP98155 873 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 CDH18Q13634 790 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 PLEKHS1Q5SXH7 462 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 TPRG1Q6ZUI0 275 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 NPAS4Q8IUM7 802 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 ARMC8Q8IUR7 673 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 SYT12Q8IV01 421 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 PLD3Q8IV08 490 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 NLGN4XQ8N0W4 816 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 SYNPOQ8N3V7 929 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 RNF175Q8N4F7 328 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 ATG16L2Q8NAA4 619 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 SLC43A3Q8NBI5 491 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 GPR26Q8NDV2 337 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 DNASE1L2Q92874 299 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 MYDGFQ969H8 173 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 EFHD2Q96C19 240 aaPredicted RBP9.48□□□□□ -0.89
CD44-206ENST00000415148 CTRCQ99895 268 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 TM6SF2Q9BZW4 377 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 REXO4Q9GZR2 422 aaKnown RBP9.48□□□□□ -0.89
CD44-206ENST00000415148 RMI1Q9H9A7 625 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 DNAJC11Q9NVH1 559 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 RUVBL1Q9Y265 456 aaKnown RBP9.48□□□□□ -0.89
CD44-206ENST00000415148 ZNF451Q9Y4E5 1061 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 PCDHB11Q9Y5F2 797 aa9.48□□□□□ -0.89
CD44-206ENST00000415148 MICAL3Q7RTP6 2002 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 LAMA2P24043 3122 aaKnown RBP9.47□□□□□ -0.89
CD44-206ENST00000415148 PIKFYVEQ9Y2I7 2098 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 C2orf78A6NCI8 922 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 EFCAB9A8MZ26 197 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 NT5C1B-RDH14C9J2C7 533 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 M0R082 166 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 PCDHGA12O60330 932 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 ABLIM3O94929 683 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 LRATO95237 230 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms