RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ZNF283Q8N7M2 679 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 ACDQ96AP0 544 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 C1orf21Q9H246 121 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SLAMF7Q9NQ25 335 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 LDOC1O95751 146 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 C4BPAP04003 597 aaKnown RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 GABRA3P34903 492 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 NPRL3Q12980 569 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 RFTN2Q52LD8 501 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 EIPR1Q53HC9 387 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SIRPB2Q5JXA9 342 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 DCDC5Q6ZRR9 648 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 DMRTB1Q96MA1 342 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 FBXW11Q9UKB1 542 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 FZD10Q9ULW2 581 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 PCDHB10Q9UN67 800 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 ANKRD34BA5PLL1 514 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 VIPR2P41587 438 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 MAZP56270 477 aaKnown RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 TAF1AQ15573 450 aaPredicted RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 C9orf135Q5VTT2 229 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 NAIF1Q69YI7 327 aaPredicted RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 STRADAQ7RTN6 431 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 CCM2Q9BSQ5 444 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 PADI2Q9Y2J8 665 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 MATN3O15232 486 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ALADP13716 330 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ITPRIPL2Q3MIP1 535 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 KIAA1211LQ6NV74 962 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 HACD2Q6Y1H2 254 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF184Q99676 751 aaPredicted RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 MAGEH1Q9H213 219 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 SLC6A15Q9H2J7 730 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 OR51B5Q9H339 312 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 RDH8Q9NYR8 311 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 AP3M1Q9Y2T2 418 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 AP1M2Q9Y6Q5 423 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 CD2P06729 351 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 DLDP09622 509 aaKnown RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 SLC11A1P49279 550 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 GBX2P52951 348 aaPredicted RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 IST1P53990 364 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 MLC1Q15049 377 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 TIGD6Q17RP2 521 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 LCN1P1Q5VSP4 162 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 SNX29P2Q8IUI4 249 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 PEX11GQ96HA9 241 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 PDE7BQ9NP56 450 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF701Q9NV72 531 aaPredicted RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 TCAF1Q9Y4C2 921 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 PCDHGA8Q9Y5G5 932 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ASGR2P07307 311 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 SLC2A7Q6PXP3 512 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ARSKQ6UWY0 536 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 PDPRQ8NCN5 879 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 OR14L1PQ8NHC6 308 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 TMEM41AQ96HV5 264 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 CNTN3Q9P232 1028 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 BCL9O00512 1426 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 DPPA5A6NC42 116 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 H3BQF6 201 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 NUAK1O60285 661 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 CCNHP51946 323 aaPredicted RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 OR4D2P58180 307 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 SSTP61278 116 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 LASP1Q14847 261 aaKnown RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 SLC26A9Q7LBE3 791 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 TFGQ92734 400 aaPredicted RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 S100PBPQ96BU1 408 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 KREMEN1Q96MU8 473 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 BEX2Q9BXY8 128 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 BEX1Q9HBH7 125 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ERVK-5Q9HDB9 667 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 FKBP14Q9NWM8 211 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 EIF3KQ9UBQ5 218 aaKnown RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 DERAQ9Y315 318 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 A0A0D9SEW6 157 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 HDAC3O15379 428 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 GRID2O43424 1007 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ENTPD5O75356 428 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 NADKO95544 446 aaPredicted RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 VAMP1P23763 118 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 MAGEA3P43357 314 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 CLCN4P51793 760 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 MPP2Q14168 576 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 LRRC37A5PQ49AS3 106 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 PDCD4Q53EL6 469 aaKnown RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 SYPL2Q5VXT5 272 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ARL9Q6T311 187 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 AADATQ8N5Z0 425 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 CLDN19Q8N6F1 224 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 RFKQ969G6 155 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 RHOJQ9H4E5 214 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 LMAN1LQ9HAT1 526 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 PRTFDC1Q9NRG1 225 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ZFR2Q9UPR6 939 aaKnown RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 CAMK2AQ9UQM7 478 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 H7BY64 318 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 SHOXO15266 292 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 CA3P07451 260 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms