RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 STC2O76061 302 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 UMPSP11172 480 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 SDC1P18827 310 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 CD70P32970 193 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 PTGER3P43115 390 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ZNF135P52742 658 aaPredicted RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 RAB8AP61006 207 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 C2orf80Q0P641 193 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ST3GAL4Q11206 333 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 ATAD3BQ5T9A4 648 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 NIPAL1Q6NVV3 410 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 NEK5Q6P3R8 708 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 MTFR2Q6P444 385 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 SBSNQ6UWP8 590 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 CCBE1Q6UXH8 406 aaPredicted RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 WASH2PQ6VEQ5 465 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 SLC24A5Q71RS6 500 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 GLCCI1Q86VQ1 547 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 PIH1D2Q8WWB5 315 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 TRNT1Q96Q11 434 aaKnown RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 DEPDC7Q96QD5 511 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 OSBPL10Q9BXB5 764 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 TVP23BQ9NYZ1 205 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 COMMD3Q9UBI1 195 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 CNOT11Q9UKZ1 510 aaKnown RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 PPT2Q9UMR5 302 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 BTBD3Q9Y2F9 522 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 TNPO3Q9Y5L0 923 aaKnown RBP8.07□□□□□ -1.12
SNX13-201ENST00000409076 SEC16AO15027 2179 aa8.07□□□□□ -1.12
SNX13-201ENST00000409076 AQP9O43315 295 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 PCDH7O60245 1069 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 ESR1P03372 595 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 ETV3P41162 512 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 RPS13P62277 151 aaKnown RBP8.06□□□□□ -1.12
SNX13-201ENST00000409076 NFATC2Q13469 925 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CAMK2GQ13555 558 aaPredicted RBP8.06□□□□□ -1.12
SNX13-201ENST00000409076 EXOC3L2Q2M3D2 409 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 HYAL4Q2M3T9 481 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 PDCD4Q53EL6 469 aaKnown RBP8.06□□□□□ -1.12
SNX13-201ENST00000409076 ZMAT1Q5H9K5 638 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CPTPQ5TA50 214 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 MANEALQ5VSG8 457 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 EIF3MQ7L2H7 374 aaKnown RBP8.06□□□□□ -1.12
SNX13-201ENST00000409076 MSRB3Q8IXL7 192 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 SETD9Q8NE22 299 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 OR10G2Q8NGC3 310 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 XAGE5Q8WWM1 108 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 PHF21AQ96BD5 680 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 TMEM169Q96HH4 297 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CEP295NLQ96MC4 621 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 PSKH2Q96QS6 385 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 OR5M11Q96RB7 305 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 ZNF382Q96SR6 550 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CD244Q9BZW8 370 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 DSN1Q9H410 356 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 GPR52Q9Y2T5 361 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 UGT2A1Q9Y4X1 527 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CLCA3PQ9Y6N3 262 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 RLFQ13129 1914 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 TMCC2O75069 709 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 TULP3O75386 442 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 MATN4O95460 622 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 FGF4P08620 206 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 C8orf89P0DMQ9 161 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CKBP12277 381 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CD40LGP29965 261 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 SRP54P61011 504 aaKnown RBP8.06□□□□□ -1.12
SNX13-201ENST00000409076 HOXC5Q00444 222 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 INO80DQ53TQ3 878 aaPredicted RBP8.06□□□□□ -1.12
SNX13-201ENST00000409076 COX20Q5RI15 118 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 ALG1LQ6GMV1 187 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 PAQR6Q6TCH4 344 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 BBS7Q8IWZ6 715 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CFAP206Q8IYR0 622 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 PACRGLQ8N7B6 248 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 ZNF740Q8NDX6 193 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 UPF1Q92900 1129 aaKnown RBP eCLIP8.06□□□□□ -1.12
SNX13-201ENST00000409076 TMEM159Q96B96 161 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 PPP1R2P1Q96PQ5 205 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 SH3GL1Q99961 368 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 P2RY13Q9BPV8 354 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 MCMBPQ9BTE3 642 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 TP63Q9H3D4 680 aaPredicted RBP8.06□□□□□ -1.12
SNX13-201ENST00000409076 TEKT2Q9UIF3 430 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 RNF6Q9Y252 685 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 PCDHGA10Q9Y5H3 936 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 TRAV19A0A0A6YYK7 116 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 A0A1B0GVM2 712 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 SLC28A1O00337 649 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CCL16O15467 120 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 PCDHGA12O60330 932 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CLDN11O75508 207 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 MED26O95402 600 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 TSPAN12O95859 305 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 KLK1P06870 262 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 CTGFP29279 349 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 YBEYP58557 167 aaPredicted RBP8.06□□□□□ -1.12
SNX13-201ENST00000409076 PYDC2Q56P42 97 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 LIPKQ5VXJ0 399 aa8.06□□□□□ -1.12
SNX13-201ENST00000409076 STEAP3Q658P3 488 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms