RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, human

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-205	ENST00000405675	CDH1	P12830	882 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	GABRG2	P18507	467 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	PSMA4	P25789	261 aa	Known RBP	27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	GLYAT	Q6IB77	296 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	ERMP1	Q7Z2K6	904 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	PHACTR4	Q8IZ21	702 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	OR10A6	Q8NH74	314 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	SETD7	Q8WTS6	366 aa	Known RBP	27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	BIRC7	Q96CA5	298 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	ITCH	Q96J02	903 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	MENT	Q9BUN1	341 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	ACAT2	Q9BWD1	397 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	FZD4	Q9ULV1	537 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	NCKAP1	Q9Y2A7	1128 aa		27.91	■■■□□ 2.06
CSNK1E-205	ENST00000405675	SLC35G4	P0C7Q5	338 aa		27.9	■■■□□ 2.06
CSNK1E-205	ENST00000405675	MTAP	Q13126	283 aa		27.9	■■■□□ 2.06
CSNK1E-205	ENST00000405675	CAPRIN2	Q6IMN6	1127 aa	Known RBP	27.9	■■■□□ 2.06
CSNK1E-205	ENST00000405675	USP30	Q70CQ3	517 aa		27.9	■■■□□ 2.06
CSNK1E-205	ENST00000405675	PROSER1	Q86XN7	944 aa		27.9	■■■□□ 2.06
CSNK1E-205	ENST00000405675	ZNF687	Q8N1G0	1237 aa		27.9	■■■□□ 2.06
CSNK1E-205	ENST00000405675	PPWD1	Q96BP3	646 aa	Known RBP	27.9	■■■□□ 2.06
CSNK1E-205	ENST00000405675	REPS1	Q96D71	796 aa		27.9	■■■□□ 2.06
CSNK1E-205	ENST00000405675	KCNK6	Q9Y257	313 aa		27.9	■■■□□ 2.06
CSNK1E-205	ENST00000405675	SLC17A4	Q9Y2C5	497 aa		27.9	■■■□□ 2.06
CSNK1E-205	ENST00000405675	CROCC	Q5TZA2	2017 aa		27.9	■■■□□ 2.06
CSNK1E-205	ENST00000405675	ERN1	O75460	977 aa	Known RBP	27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	C7	P10643	843 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	ZNF26	P17031	533 aa	Predicted RBP	27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	FOLH1	Q04609	750 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	DMPK	Q09013	629 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	ANKRD26P1	Q6NSI1	321 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	LCTL	Q6UWM7	567 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	GPR180	Q86V85	440 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	GATA6	Q92908	595 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	BTBD9	Q96Q07	612 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	APOO	Q9BUR5	198 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	REXO4	Q9GZR2	422 aa	Known RBP	27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	OSGEPL1	Q9H4B0	414 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	RMND5A	Q9H871	391 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	COQ10B	Q9H8M1	238 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	DMRT3	Q9NQL9	472 aa		27.89	■■■□□ 2.06
CSNK1E-205	ENST00000405675	TPST1	O60507	370 aa		27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	GPI	P06744	558 aa		27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	KIR3DL1	P43629	444 aa		27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	WNT3	P56703	355 aa		27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	AASDH	Q4L235	1098 aa	Predicted RBP	27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	PAGE2B	Q5JRK9	111 aa		27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	TMEM31	Q5JXX7	168 aa		27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	C10orf111	Q8N326	155 aa		27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	HMGB4	Q8WW32	186 aa		27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	EME1	Q96AY2	570 aa		27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	METTL2A	Q96IZ6	378 aa	Known RBP	27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	INSM2	Q96T92	566 aa	Predicted RBP	27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	CPPED1	Q9BRF8	314 aa	Predicted RBP	27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	MAGEL2	Q9UJ55	1249 aa		27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	PCM1	Q15154	2024 aa		27.89	■■■□□ 2.05
CSNK1E-205	ENST00000405675	SCAMP1	O15126	338 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	MYO1D	O94832	1006 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	UBTFL6	P0CB48	400 aa	Predicted RBP	27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	PCSK2	P16519	638 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	GGT1	P19440	569 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	IL10	P22301	178 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	ADHFE1	Q8IWW8	467 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	OR2T12	Q8NG77	320 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	MIEF2	Q96C03	454 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	BTBD1	Q9H0C5	482 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	TRIT1	Q9H3H1	467 aa	Known RBP	27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	LMAN1L	Q9HAT1	526 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	PREB	Q9HCU5	417 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	ACSL5	Q9ULC5	683 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	BTBD3	Q9Y2F9	522 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	KRBA1	A5PL33	1030 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	PRMT3	O60678	531 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	ANXA4	P09525	319 aa	Predicted RBP	27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	TPMT	P51580	245 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	TBCD	Q9BTW9	1192 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	TAC3	Q9UHF0	121 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	MOSPD1	Q9UJG1	213 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	SUFU	Q9UMX1	484 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675		V9GYQ6	96 aa		27.88	■■■□□ 2.05
CSNK1E-205	ENST00000405675	FAM149A	A5PLN7	773 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	FOXE1	O00358	373 aa	Predicted RBP	27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	YY2	O15391	372 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	HNRNPR	O43390	633 aa	Known RBP	27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	SCN2B	O60939	215 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	TGFB1	P01137	390 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	C1QC	P02747	245 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	RPN2	P04844	631 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	COX7A2	P14406	83 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	ACSL1	P33121	698 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	ZP2	Q05996	745 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	CYP2A13	Q16696	494 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	HIST2H2AC	Q16777	129 aa	Predicted RBP	27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	SPIN4	Q56A73	249 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	HIST2H2AA3	Q6FI13	130 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	ARMCX6	Q7L4S7	300 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	ZNF548	Q8NEK5	533 aa	Predicted RBP	27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	TRPV3	Q8NET8	790 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	DNAJB8	Q8NHS0	232 aa		27.87	■■■□□ 2.05
CSNK1E-205	ENST00000405675	NSMCE2	Q96MF7	247 aa		27.87	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms