RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 A0A0J9YVX5 310 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 MKRN2OSH3BPM6 223 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 DSCR3O14972 297 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 RFPL1O75677 317 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 ONECUT2O95948 504 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 CCND1P24385 295 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 GP5P40197 560 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 MSH2P43246 934 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 IL10RAQ13651 578 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 SSPNQ14714 243 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 WASHC2DQ5SRD0 308 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 ZNF425Q6IV72 752 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 FBXO42Q6P3S6 717 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 TTLL10Q6ZVT0 673 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 PAQR7Q86WK9 346 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 RAB43Q86YS6 212 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 SPNS2Q8IVW8 549 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 LRRC56Q8IYG6 542 aaPredicted RBP13.93□□□□□ -0.18
SEC13-208ENST00000397109 PPFIBP2Q8ND30 876 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 ADAMTS17Q8TE56 1095 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 FKBP10Q96AY3 582 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 VPS39Q96JC1 886 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 IP6K3Q96PC2 410 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 RHOJQ9H4E5 214 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 CCDC177Q9NQR7 707 aaPredicted RBP13.93□□□□□ -0.18
SEC13-208ENST00000397109 STOX2Q9P2F5 926 aaPredicted RBP13.93□□□□□ -0.18
SEC13-208ENST00000397109 ADAMTS6Q9UKP5 1117 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 HEMK1Q9Y5R4 338 aaPredicted RBP13.93□□□□□ -0.18
SEC13-208ENST00000397109 IQANK1A0A1B0GTG1 560 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 GMNCA6NCL1 334 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 SMIM23A6NLE4 172 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 PRPF4O43172 522 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEC13-208ENST00000397109 PIAS1O75925 651 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 TSPAN12O95859 305 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 ALBP02768 609 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 EZRP15311 586 aaKnown RBP13.92□□□□□ -0.18
SEC13-208ENST00000397109 GCAP28676 217 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 EMP3P54852 163 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 AP1S2P56377 157 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 GUCY1A3Q02108 690 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 EFTUD2Q15029 972 aaKnown RBP eCLIP13.92□□□□□ -0.189e-9■■■■□ 23.5
SEC13-208ENST00000397109 FRMPD2BQ6IN97 320 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 TRABD2AQ86V40 505 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 NKAPQ8N5F7 415 aaKnown RBP13.92□□□□□ -0.18
SEC13-208ENST00000397109 SLC44A1Q8WWI5 657 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 ABHD17AQ96GS6 310 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 RBBP8Q99708 897 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 OLFM1Q99784 485 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 INTS9Q9NV88 658 aaKnown RBP13.92□□□□□ -0.18
SEC13-208ENST00000397109 TXNDC16Q9P2K2 825 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 IKBKGQ9Y6K9 419 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 CCDC88CQ9P219 2028 aa13.92□□□□□ -0.18
SEC13-208ENST00000397109 MDC1Q14676 2089 aaKnown RBP13.92□□□□□ -0.18
SEC13-208ENST00000397109 MED13Q9UHV7 2174 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 LOC105369274A0A096LPK9 316 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 IGKV1-8A0A0C4DH67 115 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 LOC102723532A0A0G2JNH3 316 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 FAM95CA0A1B0GW59 222 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 HYKKA2RU49 373 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 POC1B-GALNT4F8VUJ3 575 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 H0YGG7 62 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 TXNDC9O14530 226 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 KLF7O75840 302 aaPredicted RBP13.91□□□□□ -0.18
SEC13-208ENST00000397109 EIF2S1P05198 315 aaKnown RBP13.91□□□□□ -0.18
SEC13-208ENST00000397109 ENO2P09104 434 aaPredicted RBP13.91□□□□□ -0.18
SEC13-208ENST00000397109 FOLR3P41439 243 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 ARF3P61204 181 aaPredicted RBP13.91□□□□□ -0.18
SEC13-208ENST00000397109 YBX1P67809 324 aaKnown RBP13.91□□□□□ -0.18
SEC13-208ENST00000397109 NFKB2Q00653 900 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 ZSCAN26Q16670 478 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 MUM1Q2TAK8 710 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 GRTP1Q5TC63 336 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 PRAMEF13Q5VWM6 474 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 MRPL14Q6P1L8 145 aaKnown RBP13.91□□□□□ -0.18
SEC13-208ENST00000397109 PRMT9Q6P2P2 845 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 AGTRAPQ6RW13 159 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 OVCH1Q7RTY7 1134 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 CTAGE3PQ8IX95 158 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 OR4N4Q8N0Y3 316 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 PPM1NQ8N819 430 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 OR2Y1Q8NGV0 311 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 BCAS4Q8TDM0 211 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 ATL1Q8WXF7 558 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 RERGQ96A58 199 aaPredicted RBP13.91□□□□□ -0.18
SEC13-208ENST00000397109 PTERQ96BW5 349 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 ACSS2Q9NR19 701 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 ABCF3Q9NUQ8 709 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 TMEM184CQ9NVA4 438 aa13.91□□□□□ -0.18
SEC13-208ENST00000397109 PTRH2Q9Y3E5 179 aaKnown RBP13.91□□□□□ -0.18
SEC13-208ENST00000397109 FAM107AO95990 144 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 IGHEP01854 428 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 CHN1P15882 459 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 ZNF37AP17032 561 aaPredicted RBP13.9□□□□□ -0.18
SEC13-208ENST00000397109 SAT1P21673 171 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 CNTFP26441 200 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 SLC12A2P55011 1212 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 RRADP55042 308 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 TBPL1P62380 186 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 NAE1Q13564 534 aa13.9□□□□□ -0.18
SEC13-208ENST00000397109 PRTGQ2VWP7 1150 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms