RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 RABIFP47224 123 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 GLIPR1P48060 266 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 NR2C2P49116 596 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 HOXA1P49639 335 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 PDE7AQ13946 482 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 PDK1Q15118 436 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 SLC35D3Q5M8T2 416 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 PDSS1Q5T2R2 415 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 AGAP6Q5VW22 663 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 TTC27Q6P3X3 843 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 CTR9Q6PD62 1173 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 ZCCHC12Q6PEW1 402 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 CROCCP3Q8IVE0 287 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 CIARTQ8N365 385 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 NEK11Q8NG66 645 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 SLC26A7Q8TE54 656 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 SLC13A3Q8WWT9 602 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 RUFY1Q96T51 708 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 PRMT1Q99873 361 aaKnown RBP4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 C17orf62Q9BQA9 187 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 SDCBP2Q9H190 292 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 ABCG8Q9H221 673 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 CUEDC2Q9H467 287 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 C5orf66Q9H5L9 145 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 MAGEF1Q9HAY2 307 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 HMG20BQ9P0W2 317 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 PIN4Q9Y237 131 aaKnown RBP4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 ITM2BQ9Y287 266 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 TRAV18A0A075B6X5 111 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 IGLV9-49A0A0B4J1Y8 123 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 TRBV5-5A0A0J9YX44 114 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 SYCE3A1L190 88 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 ANTXRLA6NF34 631 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 CCDC69A6NI79 296 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 NPIPA3F8WFD2 350 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 ATP6V0E1O15342 81 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 HMMRO75330 724 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 NR3C1P04150 777 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 GOT1P17174 413 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 MAPK3P27361 379 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 SRD5A2P31213 254 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 CSTF2P33240 577 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 FMO5P49326 533 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 ART1P52961 327 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 DMP1Q13316 513 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 SQLEQ14534 574 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 MAPK11Q15759 364 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 STXBP2Q15833 593 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 FUT10Q6P4F1 479 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 CATSPER4Q7RTX7 472 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 CPEB2Q7Z5Q1 589 aaKnown RBP4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 ZNF575Q86XF7 245 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 LAX1Q8IWV1 398 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 HDDC3Q8N4P3 179 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 MRPL43Q8N983 215 aaKnown RBP4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 ZNF383Q8NA42 475 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 SLC24A4Q8NFF2 622 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 MED30Q96HR3 178 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 IGSF21Q96ID5 467 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 ST6GAL2Q96JF0 529 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 ALKBH7Q9BT30 221 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 TSPYL1Q9H0U9 437 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 HSD3B7Q9H2F3 369 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 TFB2MQ9H5Q4 396 aaKnown RBP4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 SYTL2Q9HCH5 934 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 KCNMB3Q9NPA1 279 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 CD93Q9NPY3 652 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 EXOC6BQ9Y2D4 811 aa4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 MTF2Q9Y483 593 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P10-201ENST00000395823 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 PLSCR5A0PG75 271 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 FAM149AA5PLN7 773 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 TLR4O00206 839 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 FPGTO14772 594 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 IGKV2-30P06310 120 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 LIFP15018 202 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 ELAVL4P26378 380 aaKnown RBP4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 FKBP1BP68106 108 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 KEAP1Q14145 624 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 ZC2HC1CQ53FD0 456 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 TECRLQ5HYJ1 363 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 CCNYL2Q5T2Q4 361 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 FOXL2NBQ6ZUU3 175 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 TOM1L2Q6ZVM7 507 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 ERC1Q8IUD2 1116 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 NAGSQ8N159 534 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 KIAA1524Q8TCG1 905 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 PIK3R3Q92569 461 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 RFT1Q96AA3 541 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 C4orf45Q96LM5 186 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 ZNF560Q96MR9 790 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 MYCBPQ99417 103 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 DDX50Q9BQ39 737 aaKnown RBP4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 RHNO1Q9BSD3 238 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 FSD1Q9BTV5 496 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 TRMT61BQ9BVS5 477 aaKnown RBP4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 C1QTNF4Q9BXJ3 329 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 C1orf21Q9H246 121 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 CARD9Q9H257 536 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 C10orf88Q9H8K7 445 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms