RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 NLGN4XQ8N0W4 816 aa8.12□□□□□ -1.11
GAPVD1-204ENST00000394083 PNPT1Q8TCS8 783 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-204ENST00000394083 SLC13A3Q8WWT9 602 aa8.12□□□□□ -1.11
GAPVD1-204ENST00000394083 OR52A4PA6NMU1 304 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 SMIM24O75264 130 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 WBP4O75554 376 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 RASAL1O95294 804 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 GRK5P34947 590 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 BSGP35613 385 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 ISL1P61371 349 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 CAMK2GQ13555 558 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 RBBP7Q16576 425 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 ZNF284Q2VY69 593 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 INTS11Q5TA45 600 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 FRA10AC1Q70Z53 315 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 OR56A4Q8NGH8 313 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 OR2A1Q8NGT9 310 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 SNX19Q92543 992 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 SMARCD2Q92925 531 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 BMFQ96LC9 184 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 YY1AP1Q9H869 796 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 NDUFAF1Q9Y375 327 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 ASCC3Q8N3C0 2202 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 ANHXE9PGG2 379 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 ZNF7P17097 686 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 MATN1P21941 496 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 MAN2A2P49641 1150 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 CLK3P49761 638 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 INPP5AQ14642 412 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 TMEM52BQ4KMG9 183 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 PTRHD1Q6GMV3 140 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 GALNT18Q6P9A2 607 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 TMEM220Q6QAJ8 160 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 ZNF605Q86T29 641 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 CCDC103Q8IW40 242 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 OXR1Q8N573 874 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 ZSCAN1Q8NBB4 408 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 ZFP90Q8TF47 636 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 PATE1Q8WXA2 126 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 SLC6A18Q96N87 628 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 MUS81Q96NY9 551 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 PHOX2BQ99453 314 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 KLHL42Q9P2K6 505 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 KCNE3Q9Y6H6 103 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 KANSL1LA0AUZ9 987 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 SAC3D1A6NKF1 404 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 NOBOXO60393 691 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 ATE1O95260 518 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 EGFP01133 1207 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 GABRB1P18505 474 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 LIM2P55344 173 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 PMS2P3Q13401 168 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 CPZQ66K79 652 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 KLC3Q6P597 504 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 C16orf89Q6UX73 402 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 CCDC149Q6ZUS6 474 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 PRSS41Q7RTY9 318 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 JADE3Q92613 823 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 CNBD2Q96M20 576 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 CHID1Q9BWS9 393 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 C1GALT1Q9NS00 363 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 ARL15Q9NXU5 204 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 COMMD10Q9Y6G5 202 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 MED12Q93074 2177 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 IGFBP1P08833 259 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 HNRNPA1P09651 372 aaKnown RBP eCLIP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 CDK3Q00526 305 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 KLC1Q07866 573 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 CHIT1Q13231 466 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 LIN52Q52LA3 116 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 PLEKHS1Q5SXH7 462 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 RARS2Q5T160 578 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 METRNLQ641Q3 311 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 PNCKQ6P2M8 343 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 GET4Q7L5D6 327 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 SPATA19Q7Z5L4 167 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 TMEM126BQ8IUX1 230 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 TMEM52Q8NDY8 209 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 BTBD9Q96Q07 612 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 EML4Q9HC35 981 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 NAALAD2Q9Y3Q0 740 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 ZNF451Q9Y4E5 1061 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 SPAG17Q6Q759 2223 aa8.11□□□□□ -1.11
GAPVD1-204ENST00000394083 SOX1O00570 391 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 PRKD3O94806 890 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 PCBP3P57721 371 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 MXRA7P84157 204 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 GPM6BQ13491 265 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 PWP1Q13610 501 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 NR6A1Q15406 480 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 TCEA2Q15560 299 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 ANKRD54Q6NXT1 300 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 IYDQ6PHW0 289 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 RBM45Q8IUH3 476 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 NAGSQ8N159 534 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 OR4C15Q8NGM1 316 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 PDXPQ96GD0 296 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 APOLD1Q96LR9 279 aa8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 NR1H4Q96RI1 486 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-204ENST00000394083 FAM126AQ9BYI3 521 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms