RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 GJB3O75712 270 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 HLA-DQB2P05538 268 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 LCKP06239 509 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 LIPAP38571 399 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 SLC11A2P49281 568 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 CDKN2DP55273 166 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 WNT3AP56704 352 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 MTPNP58546 118 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 Q5BKY6 102 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 FAM78AQ5JUQ0 283 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 TMEM184AQ6ZMB5 413 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 GPR149Q86SP6 731 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 ADAMTSL2Q86TH1 951 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 CHPFQ8IZ52 775 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 ZFYVE19Q96K21 471 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 PPM1MQ96MI6 270 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 SDHCQ99643 169 aaPredicted RBP10.8□□□□□ -0.68
CUX1-204ENST00000393824 S1PR5Q9H228 398 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 MAGIXQ9H6Y5 334 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 RPRD1BQ9NQG5 326 aaKnown RBP10.8□□□□□ -0.68
CUX1-204ENST00000393824 DIABLOQ9NR28 239 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 CLDND1Q9NY35 253 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 LIMD1Q9UGP4 676 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 EVLQ9UI08 416 aaPredicted RBP10.8□□□□□ -0.68
CUX1-204ENST00000393824 TRAPPC4Q9Y296 219 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 NYNRINQ9P2P1 1898 aaKnown RBP10.8□□□□□ -0.68
CUX1-204ENST00000393824 ANKRD12Q6UB98 2062 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 OTOL1A6NHN0 477 aaPredicted RBP10.8□□□□□ -0.68
CUX1-204ENST00000393824 LRRC14BA6NHZ5 514 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 IFRD1O00458 451 aaPredicted RBP10.8□□□□□ -0.68
CUX1-204ENST00000393824 SSX4O60224 188 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 UGT2B17O75795 530 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 SERPINF2P08697 491 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 NAGAP17050 411 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 RHOQP17081 205 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 ITGA2P17301 1181 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 PFKLP17858 780 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 IL1RNP18510 177 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 CYP2A7P20853 494 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 OR1E1P30953 314 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 SLC15A1P46059 708 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 OR3A3P47888 321 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 LIMK1P53667 647 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 UGT2B15P54855 530 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 GPLD1P80108 840 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 PWP1Q13610 501 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 PFKFB4Q16877 469 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 BCL7AQ4VC05 210 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 IDO2Q6ZQW0 420 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 RTL10Q7L3V2 364 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 CCDC190Q86UF4 302 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 NOXA1Q86UR1 476 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 CADM2Q8N3J6 435 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 OR2T12Q8NG77 320 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 GPR150Q8NGU9 434 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 POP5Q969H6 163 aaKnown RBP10.8□□□□□ -0.68
CUX1-204ENST00000393824 TBC1D20Q96BZ9 403 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 ITCHQ96J02 903 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 VPS35Q96QK1 796 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 MKRN2Q9H000 416 aaKnown RBP10.8□□□□□ -0.68
CUX1-204ENST00000393824 TMEM248Q9NWD8 314 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 UTS2RQ9UKP6 389 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 RNF6Q9Y252 685 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 INVSQ9Y283 1065 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 BTBD3Q9Y2F9 522 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 PKP3Q9Y446 797 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 NEUROG3Q9Y4Z2 214 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 WNT6Q9Y6F9 365 aa10.8□□□□□ -0.68
CUX1-204ENST00000393824 A0A1B0GTL3 188 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 H3BQ06 376 aaPredicted RBP10.79□□□□□ -0.68
CUX1-204ENST00000393824 AP3D1O14617 1153 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 SCELO95171 688 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 DBTP11182 482 aaKnown RBP10.79□□□□□ -0.68
CUX1-204ENST00000393824 POLR2CP19387 275 aaPredicted RBP10.79□□□□□ -0.68
CUX1-204ENST00000393824 IGFBP5P24593 272 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 CTSKP43235 329 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 CHRNA4P43681 627 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 RPS5P46782 204 aaKnown RBP10.79□□□□□ -0.68
CUX1-204ENST00000393824 PPP1R8Q12972 351 aaKnown RBP10.79□□□□□ -0.68
CUX1-204ENST00000393824 ZNF77Q15935 545 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 SMU1Q2TAY7 513 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 PARP15Q460N3 678 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 C5orf22Q49AR2 442 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 SPANXN2Q5MJ10 180 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 CXorf57Q6NSI4 855 aaKnown RBP10.79□□□□□ -0.68
CUX1-204ENST00000393824 HTR3DQ70Z44 454 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 TSPYL5Q86VY4 417 aaPredicted RBP10.79□□□□□ -0.68
CUX1-204ENST00000393824 CYP4Z1Q86W10 505 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 TMEM25Q86YD3 366 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 FAM109AQ8N4B1 249 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 ZNF548Q8NEK5 533 aaPredicted RBP10.79□□□□□ -0.68
CUX1-204ENST00000393824 KBTBD8Q8NFY9 601 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 OR7D4Q8NG98 312 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 LILRB1Q8NHL6 650 aaPredicted RBP10.79□□□□□ -0.68
CUX1-204ENST00000393824 MYLIPQ8WY64 445 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 TMCO6Q96DC7 493 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 IMP4Q96G21 291 aaKnown RBP10.79□□□□□ -0.68
CUX1-204ENST00000393824 PSKH2Q96QS6 385 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 ATOH8Q96SQ7 321 aa10.79□□□□□ -0.68
CUX1-204ENST00000393824 PHOX2BQ99453 314 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms