RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TSC22D3Q99576 134 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 EBPLQ9BY08 206 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 YIPF3Q9GZM5 350 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 CORO2BQ9UQ03 480 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 H0YAE9 185 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 PDLIM1O00151 329 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 MAP3K13O43283 966 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 EPN2O95208 641 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 ANXA4P09525 319 aaPredicted RBP22.29■■□□□ 1.16
VPS16-201ENST00000380443 DRD3P35462 400 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 SOX11P35716 441 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 WNT3P56703 355 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 CDK3Q00526 305 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 NFE2L1Q14494 772 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 STARD3Q14849 445 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 GTDC1Q4AE62 458 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 SYCE2Q6PIF2 218 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 CRTC3Q6UUV7 619 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 LPCAT2Q7L5N7 544 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 SVOPLQ8N434 492 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 DHRSXQ8N5I4 330 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 C1orf52Q8N6N3 182 aaKnown RBP22.29■■□□□ 1.16
VPS16-201ENST00000380443 COQ8BQ96D53 544 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 SLC47A1Q96FL8 570 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 VPS50Q96JG6 964 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 PANX1Q96RD7 426 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 PLA2G2FQ9BZM2 168 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 H3BNH8 94 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 CCNDBP1O95273 360 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 ZNF23P17027 643 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 GPX2P18283 190 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 PAX7P23759 505 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 NR1H2P55055 460 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 RAE1P78406 368 aaKnown RBP22.28■■□□□ 1.16
VPS16-201ENST00000380443 GK3PQ14409 553 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 CPTPQ5TA50 214 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 AGBL4Q5VU57 503 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 HEATR4Q86WZ0 1026 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 RMND5BQ96G75 393 aaPredicted RBP22.28■■□□□ 1.16
VPS16-201ENST00000380443 TBCDQ9BTW9 1192 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 DUSP26Q9BV47 211 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 TEX101Q9BY14 249 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 SLC6A13Q9NSD5 602 aa22.28■■□□□ 1.16
VPS16-201ENST00000380443 CLIC1O00299 241 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 EI24O14681 340 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 KMOO15229 486 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 SH3BGRP55822 239 aaPredicted RBP22.27■■□□□ 1.16
VPS16-201ENST00000380443 RPS13P62277 151 aaKnown RBP22.27■■□□□ 1.16
VPS16-201ENST00000380443 TUBA4AP68366 448 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 SLBPQ14493 270 aaKnown RBP eCLIP22.27■■□□□ 1.16
VPS16-201ENST00000380443 PON2Q15165 354 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 PLA2G4EQ3MJ16 856 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 NAIF1Q69YI7 327 aaPredicted RBP22.27■■□□□ 1.16
VPS16-201ENST00000380443 R3HCC1LQ7Z5L2 792 aaKnown RBP22.27■■□□□ 1.16
VPS16-201ENST00000380443 ANKRD46Q86W74 232 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 PHACTR4Q8IZ21 702 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 RNF175Q8N4F7 328 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 PLA2G15Q8NCC3 412 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 OR7A2PQ8NGA2 310 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 NCLNQ969V3 563 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 SDCCAG3Q96C92 435 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 YTHDF1Q9BYJ9 559 aaKnown RBP22.27■■□□□ 1.16
VPS16-201ENST00000380443 PCBD2Q9H0N5 130 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 CLK4Q9HAZ1 481 aaKnown RBP22.27■■□□□ 1.16
VPS16-201ENST00000380443 ATP6V1HQ9UI12 483 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 ASF1AQ9Y294 204 aa22.27■■□□□ 1.16
VPS16-201ENST00000380443 PIPSLA2A3N6 862 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 IGLON5A6NGN9 336 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 MID1O15344 667 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 TFAP2AP05549 437 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 ERGP11308 486 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 CAPGP40121 348 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 CDKN2CP42773 168 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 ALDH3A2P51648 485 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 EPS8Q12929 822 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 CCDC85BQ15834 202 aaPredicted RBP22.27■■□□□ 1.15
VPS16-201ENST00000380443 KCTD21Q4G0X4 260 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 METRNLQ641Q3 311 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 CPZQ66K79 652 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 DOK6Q6PKX4 331 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 CHPFQ8IZ52 775 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 KRT78Q8N1N4 520 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 FBRSQ9HAH7 460 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 NTN4Q9HB63 628 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 DMRT3Q9NQL9 472 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 TUBA8Q9NY65 449 aaPredicted RBP22.27■■□□□ 1.15
VPS16-201ENST00000380443 SPATA7Q9P0W8 599 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 ACSL5Q9ULC5 683 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 PCDHGB4Q9UN71 923 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 SAMD4AQ9UPU9 718 aaKnown RBP22.27■■□□□ 1.15
VPS16-201ENST00000380443 PCDHB11Q9Y5F2 797 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 PCDHGB5Q9Y5G0 923 aa22.27■■□□□ 1.15
VPS16-201ENST00000380443 CROCCQ5TZA2 2017 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 GSNP06396 782 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 GDI1P31150 447 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 MTHFRP42898 656 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 TAS2R38P59533 333 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 WSCD2Q2TBF2 565 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 PRAMEF14Q5SWL7 426 aa22.26■■□□□ 1.15
VPS16-201ENST00000380443 PRAMEF13Q5VWM6 474 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms