RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TSPAN12O95859 305 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 C6orf47O95873 294 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 HOXD8P13378 290 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ETV3P41162 512 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ST3GAL4Q11206 333 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SLC14A1Q13336 389 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TMEM220Q6QAJ8 160 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CD300LGQ6UXG3 332 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 LIMS2Q7Z4I7 341 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 VRK3Q8IV63 474 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NAGSQ8N159 534 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 BPIFB1Q8TDL5 484 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ASZ1Q8WWH4 475 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ING5Q8WYH8 240 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MYDGFQ969H8 173 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 YTHDF1Q9BYJ9 559 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DCAF13Q9NV06 445 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CLEC4EQ9ULY5 219 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CLEC4AQ9UMR7 237 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RNF6Q9Y252 685 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PMF1-BGLAPU3KQ54 211 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SLC22A1O15245 554 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PRPS2P11908 318 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 FPR1P21462 350 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CCR7P32248 378 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CA5AP35218 305 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CDC42P60953 191 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ST8SIA6P61647 398 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NPRL3Q12980 569 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RNASE12Q5GAN4 147 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ZNF614Q8N883 585 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CD99L2Q8TCZ2 262 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 BRINP2Q9C0B6 783 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SPG21Q9NZD8 308 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ZNF510Q9Y2H8 683 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 WASH4PA8MWX3 477 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PCDH7O60245 1069 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 AP2A2O94973 939 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 KLK1P06870 262 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 BMP4P12644 408 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 AP1S1P61966 158 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ELP6Q0PNE2 266 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ZNF404Q494X3 552 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RAET1GQ6H3X3 334 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TMEM53Q6P2H8 277 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NCEH1Q6PIU2 408 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TRIM48Q8IWZ4 208 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 FAM9CQ8IZT9 166 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SLC5A8Q8N695 610 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CHST14Q8NCH0 376 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 C1GALT1C1Q96EU7 318 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SUV39H2Q9H5I1 410 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 J3KTA2 159 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RCVRNP35243 200 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DAPP51397 102 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 XKR7Q5GH72 579 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 OR2AP1Q8NGE2 309 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 IL17FQ96PD4 163 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 P2RY13Q9BPV8 354 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RNF186Q9NXI6 227 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 KLHL20Q9Y2M5 609 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 LYVE1Q9Y5Y7 322 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 FAM92AA1XBS5 289 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 E7EQ34 232 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 H3BM21 787 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 INPPL1O15357 1258 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 IDH3BO43837 385 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 KRT20P35900 424 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NKX3-2P78367 333 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 LMAN2Q12907 356 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DUOXA1Q1HG43 343 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 FAM214AQ32MH5 1076 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PDPRQ8NCN5 879 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DEPDC7Q96QD5 511 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SLC35A5Q9BS91 424 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RMI1Q9H9A7 625 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 THG1LQ9NWX6 298 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MS4A12Q9NXJ0 267 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TVP23BQ9NYZ1 205 aa13.92□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MYL12BO14950 172 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SELPP16109 830 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PRPS1L1P21108 318 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ACRV1P26436 265 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PSMD8P48556 350 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RNF144AP50876 292 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MANFP55145 182 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GP2P55259 537 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RING1Q06587 406 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SLC14A2Q15849 920 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 COQ5Q5HYK3 327 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ZC3H12BQ5HYM0 836 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PDZK1Q5T2W1 519 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RNF130Q86XS8 419 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 AP2M1Q96CW1 435 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SORBS1Q9BX66 1292 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 KCNH6Q9H252 994 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 HEBP1Q9NRV9 189 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 FNIP2Q9P278 1114 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 OARD1Q9Y530 152 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 211.6 ms