RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 METTL7AQ9H8H3 244 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 SERINC1Q9NRX5 453 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 GALPQ9UBC7 116 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 WNT6Q9Y6F9 365 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 TRBC2A0A5B9 178 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 ITGA10O75578 1167 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 APLP1P51693 650 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 KCNQ1P51787 676 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 CARD17Q5XLA6 110 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 MBOAT1Q6ZNC8 495 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 DNAJB7Q7Z6W7 309 aaPredicted RBP13.35□□□□□ -0.27
COL4A1-201ENST00000375820 NUDT13Q86X67 352 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 OR4K17Q8NGC6 315 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 RGMAQ96B86 450 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 LRRC58Q96CX6 371 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 PAK6Q9NQU5 681 aaPredicted RBP13.35□□□□□ -0.27
COL4A1-201ENST00000375820 MUSKO15146 869 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 CDRT1O95170 752 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 VIPR1P32241 457 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 SNU13P55769 128 aaKnown RBP13.35□□□□□ -0.27
COL4A1-201ENST00000375820 USF2Q15853 346 aaPredicted RBP13.35□□□□□ -0.27
COL4A1-201ENST00000375820 TRIM74Q86UV6 250 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 PAQR7Q86WK9 346 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 OR51B5Q9H339 312 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 ALG5Q9Y673 324 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 FAM170BA6NMN3 283 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 PLD2O14939 933 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 APOL3O95236 402 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 TNFP01375 233 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 IL1R2P27930 398 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 OR1E2P47887 323 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 SEMA3AQ14563 771 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 ACSBG2Q5FVE4 666 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 TXNRD3NBQ6F5E7 133 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 XKRXQ6PP77 449 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 GALNT10Q86SR1 603 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 OXR1Q8N573 874 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 STON2Q8WXE9 905 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 AGLP35573 1532 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 TRAV6A0A075B6T7 132 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 TULP2O00295 520 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 DUSP11O75319 330 aaKnown RBP13.35□□□□□ -0.27
COL4A1-201ENST00000375820 ADH5P11766 374 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 IST1P53990 364 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 CEACAM20Q6UY09 585 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 CLEC20AQ6ZU45 233 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 THOC6Q86W42 341 aaKnown RBP13.35□□□□□ -0.27
COL4A1-201ENST00000375820 CLDN19Q8N6F1 224 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 PXYLP1Q8TE99 480 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 CAPNS2Q96L46 248 aa13.35□□□□□ -0.27
COL4A1-201ENST00000375820 NIFKQ9BYG3 293 aaKnown RBP13.35□□□□□ -0.27
COL4A1-201ENST00000375820 FBXO9Q9UK97 447 aaPredicted RBP13.35□□□□□ -0.27
COL4A1-201ENST00000375820 NOP16Q9Y3C1 178 aaKnown RBP13.35□□□□□ -0.27
COL4A1-201ENST00000375820 USP32Q8NFA0 1604 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 LOC730098B7Z3J9 87 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 C11orf98E9PRG8 122 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 CCRL2O00421 344 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 VTCN1Q7Z7D3 282 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 LRRC57Q8N9N7 239 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 PHC3Q8NDX5 983 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 FBXL8Q96CD0 374 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 DNAJC27Q9NZQ0 273 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 STOX2Q9P2F5 926 aaPredicted RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 TRIM64BA6NI03 449 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 HSPA12AO43301 675 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 TLX2O43763 284 aaPredicted RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 CYP17A1P05093 508 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 ATP5A1P25705 553 aaKnown RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 PRDX6P30041 224 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 ADH7P40394 386 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 FNTBP49356 437 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 GPM6BQ13491 265 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 PDPRQ8NCN5 879 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 OR9I1Q8NGQ6 314 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 FLRT1Q9NZU1 646 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 ZNF860A6NHJ4 632 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 RPS13P62277 151 aaKnown RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 KLHDC10Q6PID8 442 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 MINDY2Q8NBR6 621 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 NLGN2Q8NFZ4 835 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 OR5J2Q8NH18 312 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 LIN28AQ9H9Z2 209 aaKnown RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 NANSQ9NR45 359 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 PRDM4Q9UKN5 801 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 SRRM3A6NNA2 597 aaPredicted RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 XPNPEP2O43895 674 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 XRCC1P18887 633 aaPredicted RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 CSNK2A2P19784 350 aaPredicted RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 AGXTP21549 392 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 FXYD6P3P58550 94 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 ERVK-8P63133 956 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 HNRNPDQ14103 355 aaKnown RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 GRK1Q15835 563 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 RBM20Q5T481 1227 aaKnown RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 ZNF565Q8N9K5 539 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 POP5Q969H6 163 aaKnown RBP13.34□□□□□ -0.27
COL4A1-201ENST00000375820 TSPAN18Q96SJ8 248 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 NDC1Q9BTX1 674 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 OSBPL7Q9BZF2 842 aa13.34□□□□□ -0.27
COL4A1-201ENST00000375820 WASHC1A8K0Z3 465 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms