RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 Q96MT0 163 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 TRIB3Q96RU7 358 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 FEVQ99581 238 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 SUV39H2Q9H5I1 410 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 C11orf16Q9NQ32 467 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 TOR4AQ9NXH8 423 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 FADS2P1A8MWK0 482 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 PCDH7O60245 1069 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 CCNB2O95067 398 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 IFNW1P05000 195 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 STSP08842 583 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 PCSK2P16519 638 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 PSMA1P25786 263 aaKnown RBP12.74□□□□□ -0.37
CUL4A-203ENST00000375441 HTRA3P83110 453 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 ARF5P84085 180 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 NOGQ13253 232 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.74□□□□□ -0.374e-7■■□□□ 12
CUL4A-203ENST00000375441 TPRG1Q6ZUI0 275 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 PRSS48Q7RTY5 328 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 MBOAT4Q96T53 435 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 ZNF282Q9UDV7 671 aaPredicted RBP12.74□□□□□ -0.37
CUL4A-203ENST00000375441 SSR3Q9UNL2 185 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 YIPF1Q9Y548 306 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 HSPE1-MOB4S4R3N1 261 aa12.74□□□□□ -0.37
CUL4A-203ENST00000375441 EIF2S1P05198 315 aaKnown RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 PRR35P0CG20 571 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 FSHRP23945 695 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 ST3GAL4Q11206 333 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 MRPL28Q13084 256 aaKnown RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 IFNL1Q8IU54 200 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 ZNF675Q8TD23 568 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 DPF3Q92784 378 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 PDLIM5Q96HC4 596 aaKnown RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 CAPNS2Q96L46 248 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 COL21A1Q96P44 957 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 ARHGAP39Q9C0H5 1083 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 IL1RAPQ9NPH3 570 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 ABCB8Q9NUT2 735 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 ELOVL2Q9NXB9 296 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 H2AFY2Q9P0M6 372 aaPredicted RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 TNNI3P19429 210 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 TNFRSF1BP20333 461 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 GADD45AP24522 165 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 PRKAG1P54619 331 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 AP1S2P56377 157 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 CTBSQ01459 385 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 CREMQ03060 361 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 TP53BP2Q13625 1128 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 SCARB2Q14108 478 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 MAD2L1BPQ15013 274 aaPredicted RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 SF1Q15637 639 aaKnown RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 TSTQ16762 297 aaKnown RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 GPRC6AQ5T6X5 926 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 MED27Q6P2C8 311 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 THOC6Q86W42 341 aaKnown RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 NPAS3Q8IXF0 933 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 RNF175Q8N4F7 328 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 CAMKK1Q8N5S9 505 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 SLC35A5Q9BS91 424 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 C1QTNF3Q9BXJ4 246 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 SERPINB7O75635 380 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 TSPAN12O95859 305 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 BMP4P12644 408 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 HNF4AP41235 474 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 CDKN2CP42773 168 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 SGSHP51688 502 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 NKX2-5P52952 324 aaPredicted RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 ADPRMQ3LIE5 342 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 ATP13A5Q4VNC0 1218 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 CARD16Q5EG05 197 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 CAPN13Q6MZZ7 669 aaPredicted RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 CEP68Q76N32 757 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 APCDD1Q8J025 514 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 OR6Q1Q8NGQ2 317 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 OTUB1Q96FW1 271 aaPredicted RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 PKMYT1Q99640 499 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 CPPED1Q9BRF8 314 aaPredicted RBP12.73□□□□□ -0.37
CUL4A-203ENST00000375441 NTMT1Q9BV86 223 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 SNTG1Q9NSN8 517 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 POFUT2Q9Y2G5 429 aa12.73□□□□□ -0.37
CUL4A-203ENST00000375441 H3BM21 787 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 SMAD6O43541 496 aaKnown RBP12.72□□□□□ -0.37
CUL4A-203ENST00000375441 TGFB1P01137 390 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 GALTP07902 379 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 LAMP1P11279 417 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 ATP1B2P14415 290 aaPredicted RBP12.72□□□□□ -0.37
CUL4A-203ENST00000375441 PPP2R1BP30154 601 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 RPL3P39023 403 aaKnown RBP12.72□□□□□ -0.37
CUL4A-203ENST00000375441 MAGEA10P43363 369 aaPredicted RBP12.72□□□□□ -0.37
CUL4A-203ENST00000375441 UGT2B15P54855 530 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 CYP4F8P98187 520 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 AQP6Q13520 282 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 ZFP69Q49AA0 526 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 TRIQKQ629K1 86 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 TMPRSS11AQ6ZMR5 421 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 DMRTB1Q96MA1 342 aa12.72□□□□□ -0.37
CUL4A-203ENST00000375441 ZBTB20Q9HC78 741 aaPredicted RBP12.72□□□□□ -0.37
CUL4A-203ENST00000375441 HMX1Q9NP08 348 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms