RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 FAM131CQ96AQ9 280 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 HSPA12BQ96MM6 686 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 OR52E6Q96RD3 313 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 RBM38Q9H0Z9 239 aaKnown RBP15.04■□□□□ -0
CCDC40-202ENST00000374876 SMPD3Q9NY59 655 aaPredicted RBP15.04■□□□□ -0
CCDC40-202ENST00000374876 PTTG2Q9NZH5 202 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 NEUROG3Q9Y4Z2 214 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 GPR179Q6PRD1 2367 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 CFAP99D6REC4 459 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 KPNA5O15131 536 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 CLOCKO15516 846 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 PLRG1O43660 514 aaKnown RBP15.03■□□□□ -0
CCDC40-202ENST00000374876 RAP2AP10114 183 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 CYP2A6P11509 494 aaPredicted RBP15.03■□□□□ -0
CCDC40-202ENST00000374876 ZNF30P17039 623 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 CYP2A7P20853 494 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 SP140Q13342 867 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 GBX1Q14549 363 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 PLEKHS1Q5SXH7 462 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 DNAJC14Q6Y2X3 702 aaPredicted RBP15.03■□□□□ -0
CCDC40-202ENST00000374876 B3GNT6Q6ZMB0 384 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 VRK3Q8IV63 474 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 ZNF786Q8N393 782 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 OR10A6Q8NH74 314 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 FIG4Q92562 907 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 CCDC115Q96NT0 180 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 FAM83DQ9H4H8 585 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 ITM2BQ9Y287 266 aa15.03■□□□□ -0
CCDC40-202ENST00000374876 DEAF1O75398 565 aaPredicted RBP15.02■□□□□ -0
CCDC40-202ENST00000374876 MTX2O75431 263 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 ITPKAP23677 461 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 TUBA4AP68366 448 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 CHRNB3Q05901 458 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 PTCHD3Q3KNS1 767 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 GGTA1PQ4G0N0 100 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 BORAQ6PGQ7 559 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 C11orf74Q86VG3 221 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 RIMKLAQ8IXN7 391 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 DHRSXQ8N5I4 330 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 MCOLN3Q8TDD5 553 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 SCAMP4Q969E2 229 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 PYCR2Q96C36 320 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 SH3GL3Q99963 347 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 FADS3Q9Y5Q0 445 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 DOCK9Q9BZ29 2069 aa15.02■□□□□ -0
CCDC40-202ENST00000374876 LRRC72A6NJI9 287 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 METTL12A8MUP2 240 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 SLC16A5O15375 505 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 PCDH8O95206 1070 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 MAT2AP31153 395 aaKnown RBP15.02□□□□□ -0.01
CCDC40-202ENST00000374876 VIPR1P32241 457 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 SLC6A12P48065 614 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 PPP2CBP62714 309 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 PPP2CAP67775 309 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 KCTD21Q4G0X4 260 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 FAM9CQ8IZT9 166 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 SNX19Q92543 992 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 ELMO1Q92556 727 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 UGT2B28Q9BY64 529 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 GORASP2Q9H8Y8 452 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 TMEM74BQ9NUR3 256 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 DKK3Q9UBP4 350 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 ZNF639Q9UID6 485 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 AP3M1Q9Y2T2 418 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 FRYLO94915 3013 aa15.02□□□□□ -0.01
CCDC40-202ENST00000374876 PLXNB3Q9ULL4 1909 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 PROB1E7EW31 1015 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 GFYI3L273 518 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 SPINT1O43278 529 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 SEC24DO94855 1032 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-202ENST00000374876 XPAP23025 273 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-202ENST00000374876 CAPGP40121 348 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 NEK2P51955 445 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 AP1S2P56377 157 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 ZXDCQ2QGD7 858 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-202ENST00000374876 PYCR3Q53H96 274 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 ASCL5Q7RTU5 278 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 HSD11B1LQ7Z5J1 315 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 ZNF548Q8NEK5 533 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-202ENST00000374876 CADM4Q8NFZ8 388 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 DNAJB8Q8NHS0 232 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 KLK6Q92876 244 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 FBXL20Q96IG2 436 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 MPP4Q96JB8 637 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 ARRDC1-AS1Q9H2J1 176 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 IKZF5Q9H5V7 419 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 DNAJC11Q9NVH1 559 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 SLC25A37Q9NYZ2 338 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 DLGAP4Q9Y2H0 992 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 SLCO1B1Q9Y6L6 691 aa15.01□□□□□ -0.01
CCDC40-202ENST00000374876 ZFHX2Q9C0A1 2572 aaPredicted RBP15□□□□□ -0.01
CCDC40-202ENST00000374876 KCNE1BA0A087WTH5 132 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 ELOVL7A1L3X0 281 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 RNGTTO60942 597 aaKnown RBP15□□□□□ -0.01
CCDC40-202ENST00000374876 IGHV4-34P06331 123 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 PRPS2P11908 318 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 MAPK1P28482 360 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 S100A3P33764 101 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 CDH15P55291 814 aa15□□□□□ -0.01
CCDC40-202ENST00000374876 CLDN8P56748 225 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms