RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 NDUFV1P49821 464 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 ARSDP51689 593 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 LARS2Q15031 903 aaKnown RBP12.52□□□□□ -0.41
PRPF4-201ENST00000374198 ZMYND11Q15326 602 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 GRK1Q15835 563 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 LCN1P1Q5VSP4 162 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 ADGRG3Q86Y34 549 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 PLPP6Q8IY26 295 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 LPCAT1Q8NF37 534 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 VANGL1Q8TAA9 524 aaPredicted RBP12.52□□□□□ -0.41
PRPF4-201ENST00000374198 C9orf43Q8TAL5 461 aaPredicted RBP12.52□□□□□ -0.41
PRPF4-201ENST00000374198 KLHL6Q8WZ60 621 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 ATG4CQ96DT6 458 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 SENP8Q96LD8 212 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 QRFPRQ96P65 431 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 C1QTNF3Q9BXJ4 246 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 ABCB9Q9NP78 766 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 A0A1W2PRG6 482 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 FABP3P05413 133 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 TGM4P49221 684 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 ZNF33BQ06732 778 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 NR6A1Q15406 480 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 AP5B1Q2VPB7 878 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 FLYWCH1Q4VC44 716 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 RFTN2Q52LD8 501 aaPredicted RBP12.52□□□□□ -0.41
PRPF4-201ENST00000374198 PYDC2Q56P42 97 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 NADSYN1Q6IA69 706 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 ANKRD54Q6NXT1 300 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 ZNF605Q86T29 641 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 DUSP18Q8NEJ0 188 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 ZC3HAV1LQ96H79 300 aaKnown RBP12.52□□□□□ -0.41
PRPF4-201ENST00000374198 TAPBPLQ9BX59 468 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 POPDC3Q9HBV1 291 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 THUMPD1Q9NXG2 353 aaKnown RBP12.52□□□□□ -0.41
PRPF4-201ENST00000374198 OR12D3Q9UGF7 316 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 TRAV19A0A0A6YYK7 116 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 NCF1BA6NI72 391 aaPredicted RBP12.51□□□□□ -0.41
PRPF4-201ENST00000374198 NCF1CA8MVU1 366 aaPredicted RBP12.51□□□□□ -0.41
PRPF4-201ENST00000374198 ZBTB42B2RXF5 422 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 RAF1P04049 648 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 TP53P04637 393 aaPredicted RBP12.51□□□□□ -0.41
PRPF4-201ENST00000374198 TSPAN19P0C672 248 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 TGFB3P10600 412 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 COL6A1P12109 1028 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 NCF1P14598 390 aaPredicted RBP12.51□□□□□ -0.41
PRPF4-201ENST00000374198 ATF6P18850 670 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 LMO2P25791 158 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 CLCN3P51790 818 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 BTN1A1Q13410 526 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 KLHL17Q6TDP4 642 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 CRYBG2Q8N1P7 616 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 HERVK_113Q902F9 699 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 PPP1R2P1Q96PQ5 205 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 HBEGFQ99075 208 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 MIXL1Q9H2W2 232 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 REEP1Q9H902 201 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 SLC6A13Q9NSD5 602 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 CLCA3PQ9Y6N3 262 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 TRBV5-3A0A0A0MS03 114 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 RPS10-NUDT3A0A1W2PQS6 291 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 OR5K4A6NMS3 321 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 FABP7O15540 132 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 CCNDBP1O95273 360 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 HLA-DQB2P05538 268 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 PGRP06401 933 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 TPOP07202 933 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 CLEC2LP0C7M8 214 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 HTR6P50406 440 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 WNT3AP56704 352 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 VLDLRP98155 873 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 PTGR1Q14914 329 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 TSNQ15631 228 aaKnown RBP12.51□□□□□ -0.41
PRPF4-201ENST00000374198 CLLU1Q5K131 121 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 IL27RAQ6UWB1 636 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 TLK2Q86UE8 772 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 FAM124AQ86V42 546 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 ATPAF2Q8N5M1 289 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 OR8K5Q8NH50 307 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 CLHC1Q8NHS4 586 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 DIRAS2Q96HU8 199 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 FAM167AQ96KS9 214 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 CDK15Q96Q40 435 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 CDCA4Q9BXL8 241 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 ARHGAP39Q9C0H5 1083 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 MCCC2Q9HCC0 563 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 RBFOX1Q9NWB1 397 aaKnown RBP12.51□□□□□ -0.41
PRPF4-201ENST00000374198 VPS9D1Q9Y2B5 631 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 LOC285556D6RIA3 1793 aa12.51□□□□□ -0.41
PRPF4-201ENST00000374198 TSPAN12O95859 305 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 RRASP10301 218 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 ARSBP15848 533 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 HOXB8P17481 243 aaPredicted RBP12.5□□□□□ -0.41
PRPF4-201ENST00000374198 CLDN20P56880 219 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 ERVPABLB-1P60509 514 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 WSCD2Q2TBF2 565 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 SPANXN4Q5MJ08 99 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 GPR139Q6DWJ6 353 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 LIPIQ6XZB0 460 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 TIGD4Q8IY51 512 aa12.5□□□□□ -0.41
PRPF4-201ENST00000374198 CPA6Q8N4T0 437 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms