RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 BEST3Q8N1M1 668 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 TAB3Q8N5C8 712 aaPredicted RBP14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 PRELID2Q8N945 189 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 DNAAF3Q8N9W5 541 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 MDS2Q8NDY4 140 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 HMGCLL1Q8TB92 370 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 C1orf54Q8WWF1 131 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 NINJ1Q92982 152 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 RERGQ96A58 199 aaPredicted RBP14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 SCMH1Q96GD3 660 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 IMMP1LQ96LU5 166 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 FOPNLQ96NB1 174 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 FRMD6Q96NE9 622 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 DMRTA2Q96SC8 542 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 CARD6Q9BX69 1037 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 DRC3Q9H069 523 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 TSPAN10Q9H1Z9 355 aaPredicted RBP14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 KLHL1Q9NR64 748 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 CIDEBQ9UHD4 219 aa14.05□□□□□ -0.16
CDKN1A-202ENST00000373711 LOC105369274A0A096LPK9 316 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 LOC102723532A0A0G2JNH3 316 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 GPC4O75487 556 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 GAS8O95995 478 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 RBP3P10745 1247 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 ZNF24P17028 368 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 CCR7P32248 378 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 CCNFP41002 786 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 TUBA3CQ13748 450 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 GRB7Q14451 532 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 SPARCL1Q14515 664 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 EXT1Q16394 746 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 NDUFA9Q16795 377 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 TUBA3EQ6PEY2 450 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 AFTPHQ6ULP2 937 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 ZNF572Q7Z3I7 529 aaPredicted RBP14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 DOLPP1Q86YN1 238 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 TGIF2LYQ8IUE0 185 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 OR4N4Q8N0Y3 316 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 CSNK1A1LQ8N752 337 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 ACTL9Q8TC94 416 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 MAIP1Q8WWC4 291 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 NAP1L3Q99457 506 aaPredicted RBP14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 FOXC2Q99958 501 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 KCNK13Q9HB14 408 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 SPATA7Q9P0W8 599 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 KCNN3Q9UGI6 736 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 EDARQ9UNE0 448 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 ABCA4P78363 2273 aa14.04□□□□□ -0.16
CDKN1A-202ENST00000373711 OR2A25A4D2G3 310 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 H0YGG7 62 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 KPNA5O15131 536 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 PSMD3O43242 534 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 PKMP14618 531 aaKnown RBP14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 IGFBP2P18065 325 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 PSMA3P25788 255 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 PSMB5P28074 263 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 DNAJA1P31689 397 aaKnown RBP14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 AVPR1BP47901 424 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 AGTR2P50052 363 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 TAS2R50P59544 299 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 EIF3EP60228 445 aaKnown RBP14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 ARF3P61204 181 aaPredicted RBP14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 OC90Q02509 493 aaPredicted RBP14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 CKAP4Q07065 602 aaKnown RBP14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 C2orf54Q08AI8 447 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 SNX1Q13596 522 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 CYP1B1Q16678 543 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 P3H1Q32P28 736 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 AARS2Q5JTZ9 985 aaKnown RBP14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 MFSD4BQ5TF39 518 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 H3F3CQ6NXT2 135 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 CPEB2Q7Z5Q1 589 aaKnown RBP14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 KLHDC8BQ8IXV7 354 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 SLC5A8Q8N695 610 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 AMER3Q8N944 861 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 LRRN4CLQ8ND94 238 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 SPATA4Q8NEY3 305 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 SKA2Q8WVK7 121 aaPredicted RBP14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 ATG4AQ8WYN0 398 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 SIGLEC12Q96PQ1 595 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 PANX3Q96QZ0 392 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 C10orf88Q9H8K7 445 aa14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 RUVBL1Q9Y265 456 aaKnown RBP14.03□□□□□ -0.16
CDKN1A-202ENST00000373711 PHF3Q92576 2039 aaKnown RBP14.02□□□□□ -0.16
CDKN1A-202ENST00000373711 A0A1B0GTL3 188 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 MROH6A6NGR9 719 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 FFAR3O14843 346 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 GPR42O15529 346 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 OR1I1O60431 355 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 SEC24DO94855 1032 aaPredicted RBP14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 SLCO2B1O94956 709 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 ZWINTO95229 277 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 CCNDBP1O95273 360 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 TPH1P17752 444 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 CHRNB4P30926 498 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 KCNJ1P48048 391 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 FAM53BQ14153 422 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 CCNG2Q16589 344 aa14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 KCTD19Q17RG1 926 aaPredicted RBP14.02□□□□□ -0.17
CDKN1A-202ENST00000373711 PARP6Q2NL67 630 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms