RNA–Protein interactions for RNA: ENST00000372247.6

RNF220-204, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF220, Length 3,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-204ENST00000372247 WFDC5Q8TCV5 224 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.276e-8■■■□□ 15.9
RNF220-204ENST00000372247 SCRN2Q96FV2 425 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 TSSK3Q96PN8 268 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 THSD1Q9NS62 852 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 ABCB8Q9NUT2 735 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 ARL15Q9NXU5 204 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 RUVBL1Q9Y265 456 aaKnown RBP13.35□□□□□ -0.27
RNF220-204ENST00000372247 ARRDC5A6NEK1 342 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 TSPAN3O60637 253 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 GCM2O75603 506 aaPredicted RBP13.35□□□□□ -0.27
RNF220-204ENST00000372247 SEC24AO95486 1093 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 GSNP06396 782 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 PTPN2P17706 415 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 ITGB6P18564 788 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 POLR2EP19388 210 aaKnown RBP13.35□□□□□ -0.27
RNF220-204ENST00000372247 HOXD12P35452 270 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 LIMS1P48059 325 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 PFN3P60673 137 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 ZCCHC8Q6NZY4 707 aaKnown RBP13.35□□□□□ -0.27
RNF220-204ENST00000372247 PNCKQ6P2M8 343 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 UBE2R2Q712K3 238 aaPredicted RBP13.35□□□□□ -0.27
RNF220-204ENST00000372247 HORMAD1Q86X24 394 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 NPAS4Q8IUM7 802 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 DENND6BQ8NEG7 585 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 EGLN2Q96KS0 407 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 CTRCQ99895 268 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 RHNO1Q9BSD3 238 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 NFKBIL1Q9UBC1 381 aaPredicted RBP13.35□□□□□ -0.27
RNF220-204ENST00000372247 KLK4Q9Y5K2 254 aa13.35□□□□□ -0.27
RNF220-204ENST00000372247 SCAMP2O15127 329 aaKnown RBP13.34□□□□□ -0.27
RNF220-204ENST00000372247 FADS2O95864 444 aaKnown RBP13.34□□□□□ -0.27
RNF220-204ENST00000372247 PSMB9P28065 219 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 LIPAP38571 399 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 SELENBP1Q13228 472 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 TEAD4Q15561 434 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 SMN1Q16637 294 aaKnown RBP13.34□□□□□ -0.27
RNF220-204ENST00000372247 TMEM236Q5W0B7 351 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 TMEM173Q86WV6 379 aaPredicted RBP13.34□□□□□ -0.27
RNF220-204ENST00000372247 SLX1AQ9BQ83 275 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 DCSTAMPQ9H295 470 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 PCDHGA2Q9Y5H1 932 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 ALPK3Q96L96 1907 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 CLCA1A8K7I4 914 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 TOR1BO14657 336 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 SCAMP3O14828 347 aaKnown RBP13.34□□□□□ -0.27
RNF220-204ENST00000372247 KPNA5O15131 536 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 ZNF682O95780 498 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 EIF2B2P49770 351 aaKnown RBP13.34□□□□□ -0.27
RNF220-204ENST00000372247 HMGA2P52926 109 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 CD300CQ08708 224 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 PTCHD3Q3KNS1 767 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 SGO1Q5FBB7 561 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 PERM1Q5SV97 790 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 PRSS55Q6UWB4 352 aaPredicted RBP13.34□□□□□ -0.27
RNF220-204ENST00000372247 VTCN1Q7Z7D3 282 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 ANKRD46Q86W74 232 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 MYDGFQ969H8 173 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 ZHX1-C8orf76Q96EF9 292 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 COPS8Q99627 209 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 CPEB1Q9BZB8 566 aaKnown RBP13.34□□□□□ -0.27
RNF220-204ENST00000372247 PCDHB7Q9Y5E2 793 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 LYVE1Q9Y5Y7 322 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 DENND4CQ5VZ89 1909 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 DSCR3O14972 297 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 YY2O15391 372 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 LCKP06239 509 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 OR56A5P0C7T3 313 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 CTSKP43235 329 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 ASMTP46597 345 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 TMED10P49755 219 aaKnown RBP13.34□□□□□ -0.27
RNF220-204ENST00000372247 FLT3LGP49771 235 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 MVDP53602 400 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 GTF2H3Q13889 308 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 PGS1Q32NB8 556 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 DEPDC1Q5TB30 811 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 CRELD1Q96HD1 420 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 PANX1Q96RD7 426 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 DOHHQ9BU89 302 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 TMPRSS11EQ9UL52 423 aa13.34□□□□□ -0.27
RNF220-204ENST00000372247 C2orf78A6NCI8 922 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 NPIPB15A6NHN6 443 aaPredicted RBP13.33□□□□□ -0.28
RNF220-204ENST00000372247 SMAD6O43541 496 aaKnown RBP13.33□□□□□ -0.28
RNF220-204ENST00000372247 CD22P20273 847 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 RAE1P78406 368 aaKnown RBP13.33□□□□□ -0.28
RNF220-204ENST00000372247 GRHL2Q6ISB3 625 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 SLC22A16Q86VW1 577 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 NAT16Q8N8M0 369 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 MCFD2Q8NI22 146 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 RPL3LQ92901 407 aaKnown RBP13.33□□□□□ -0.28
RNF220-204ENST00000372247 APOLD1Q96LR9 279 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 TPT1P8Q9HAU6 139 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 ATP6V1HQ9UI12 483 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 FNDC3AQ9Y2H6 1198 aaKnown RBP13.33□□□□□ -0.28
RNF220-204ENST00000372247 K7ERQ8 282 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 RNASET2O00584 256 aaKnown RBP13.33□□□□□ -0.28
RNF220-204ENST00000372247 ADAMDEC1O15204 470 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 AP2A2O94973 939 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 IGSF6O95976 241 aa13.33□□□□□ -0.28
RNF220-204ENST00000372247 C1QCP02747 245 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms