RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 PDYNP01213 254 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 ASLP04424 464 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 CYP11A1P05108 521 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 BCKDHAP12694 445 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 SLC6A4P31645 630 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 HTR7P34969 479 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 NRIP1P48552 1158 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 NCBP2P52298 156 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 TPTEP56180 551 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 LETMD1Q6P1Q0 360 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 CEACAM20Q6UY09 585 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 ERMP1Q7Z2K6 904 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 ZFP28Q8NHY6 868 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 TIFAQ96CG3 184 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 SLC38A2Q96QD8 506 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 POLR2J2Q9GZM3 115 aaKnown RBP8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 BRD7Q9NPI1 651 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 ACTR3BQ9P1U1 418 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 DNMT3AQ9Y6K1 912 aaPredicted RBP8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 PARP14Q460N5 1801 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 TTC3P53804 2025 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 GUCY1B2O75343 617 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 PRPS2P11908 318 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 CDH1P12830 882 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 SLC26A3P40879 764 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 TMEM115Q12893 351 aaPredicted RBP8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 ATAT1Q5SQI0 421 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 EMC10Q5UCC4 262 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 FAAH2Q6GMR7 532 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 HDDC2Q7Z4H3 204 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 ZNF761Q86XN6 746 aaPredicted RBP8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 RNF130Q86XS8 419 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 HSH2DQ96JZ2 352 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 ZFP3Q96NJ6 502 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 DERL2Q9GZP9 239 aa8.84□□□□□ -0.99
SMARCA1-202ENST00000371122 POLR2AP24928 1970 aaKnown RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 FEZF1A0PJY2 475 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 A8MV72 311 aaPredicted RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 MUSKO15146 869 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 MAGEB3O15480 346 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 ZNF623O75123 536 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 SOX30O94993 753 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 NFATC1O95644 943 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 APODP05090 189 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 CKMT1AP12532 417 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 KCNC1P48547 511 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 ERVK-21P61565 698 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 C1orf61Q13536 156 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 CRTC2Q53ET0 693 aaPredicted RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 IFI44LQ53G44 452 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 TMEM236Q5W0B7 351 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 FAM217AQ8IXS0 508 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 FRS2Q8WU20 508 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 CITED4Q96RK1 184 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 LMAN2LQ9H0V9 348 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.83□□□□□ -1
SMARCA1-202ENST00000371122 STMN3Q9NZ72 180 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 ZNF222Q9UK12 451 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 ZDBF2Q9HCK1 2354 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 TRBC2A0A5B9 178 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 AQP12BA6NM10 295 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 GABBR2O75899 941 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 MATN4O95460 622 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 OAS1P00973 400 aaKnown RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 DHRS4L1P0CG22 281 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 OXTRP30559 389 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 GUCA1AP43080 201 aaPredicted RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 ASMTP46597 345 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 RGS1Q08116 209 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 TOP3AQ13472 1001 aaPredicted RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 SCARB2Q14108 478 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 TIMM50Q3ZCQ8 353 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 C5orf22Q49AR2 442 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 CRB2Q5IJ48 1285 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 OR2T5Q6IEZ7 315 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 SLC8B1Q6J4K2 584 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 OR4N5Q8IXE1 308 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 AQP12AQ8IXF9 295 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 CMTR2Q8IYT2 770 aaKnown RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 OR10H4Q8NGA5 316 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 OR2T29Q8NH02 315 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 GPR151Q8TDV0 419 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 GRHL3Q8TE85 626 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 FUBP1Q96AE4 644 aaKnown RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 NUSAP1Q9BXS6 441 aaKnown RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 RPF2Q9H7B2 306 aaKnown RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 NLE1Q9NVX2 485 aaPredicted RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 SMOXQ9NWM0 555 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 DHRS7Q9Y394 339 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 A8MU76 341 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 EFCAB9A8MZ26 197 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 QSOX1O00391 747 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 BPIP17213 487 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 IFNGR2P38484 337 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 ARSFP54793 590 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 CDKL1Q00532 357 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 ZNHIT3Q15649 155 aaPredicted RBP8.83□□□□□ -1
SMARCA1-202ENST00000371122 AKIRIN2Q53H80 203 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 ARMCX6Q7L4S7 300 aa8.83□□□□□ -1
SMARCA1-202ENST00000371122 CCDC116Q8IYX3 515 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms