RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 EFL1Q7Z2Z2 1120 aaKnown RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 ZSWIM9Q86XI8 627 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 FAR1Q8WVX9 515 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 RHBDF1Q96CC6 855 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 LGALS12Q96DT0 336 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 REEP1Q9H902 201 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 THUMPD1Q9NXG2 353 aaKnown RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 TUBA8Q9NY65 449 aaPredicted RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 CFAP20Q9Y6A4 193 aaKnown RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 TYW5A2RUC4 315 aaKnown RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 KPNA4O00629 521 aaPredicted RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 SEPT4O43236 478 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 TULP3O75386 442 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 SEC14L2O76054 403 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 KRT6AP02538 564 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 KRT6BP04259 564 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 CKMT1AP12532 417 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 CCL5P13501 91 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 SDC1P18827 310 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 DGKAP23743 735 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 SERPINB10P48595 397 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 KRT6CP48668 564 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 ALDH9A1P49189 494 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 CDH4P55283 916 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 RPP38P78345 283 aaKnown RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 CACNG1Q06432 222 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 TRIM60Q495X7 471 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 COQ5Q5HYK3 327 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 GBF1Q92538 1859 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 PEX13Q92968 403 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 OTULINQ96BN8 352 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 PYURFQ96I23 114 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 NELL2Q99435 816 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 CD244Q9BZW8 370 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 DCSTAMPQ9H295 470 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 KAT8Q9H7Z6 458 aaKnown RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 TMEM184CQ9NVA4 438 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 INTS6Q9UL03 887 aaKnown RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 A0A1B0GVM2 712 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 H3BM21 787 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 LRRTM2O43300 516 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 RGS10O43665 173 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 KDELR3O43731 214 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 PCDHGA12O60330 932 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 ADAMTS4O75173 837 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 CLDN11O75508 207 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 VNN2O95498 520 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 CCDC159P0C7I6 412 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 TCEA1P23193 301 aaKnown RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 GADD45AP24522 165 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 CCR7P32248 378 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 TTKP33981 857 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 LIPAP38571 399 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 PPP2R2BQ00005 443 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 SPIBQ01892 262 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 CTF1Q16619 201 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 LEXMQ3ZCV2 418 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 ZNF852Q6ZMS4 543 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 USP51Q70EK9 711 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 MMP21Q8N119 569 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 STX19Q8N4C7 294 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 PDPRQ8NCN5 879 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 VANGL1Q8TAA9 524 aaPredicted RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 ZNF420Q8TAQ5 688 aaPredicted RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 DNASE1L2Q92874 299 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 P2RY13Q9BPV8 354 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 TCF25Q9BQ70 676 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 COPS4Q9BT78 406 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 SORBS1Q9BX66 1292 aaKnown RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.6□□□□□ -1.03
THBS3-201ENST00000368378 C11orf16Q9NQ32 467 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 STARD7Q9NQZ5 370 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 KCTD5Q9NXV2 234 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 NUDT4Q9NZJ9 180 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 ITGB1BP2Q9UKP3 347 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 PCDHGA10Q9Y5H3 936 aa8.6□□□□□ -1.03
THBS3-201ENST00000368378 CHD5Q8TDI0 1954 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 ZNF840PA6NDX5 716 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 ANKRD28O15084 1053 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 AIREO43918 545 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 EPN2O95208 641 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 CD160O95971 181 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 TGFB1P01137 390 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 IGLV3-27P01718 113 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 FABP3P05413 133 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 SPTBP11277 2137 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 ZNF16P17020 682 aaPredicted RBP8.59□□□□□ -1.03
THBS3-201ENST00000368378 SYN1P17600 705 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 GSTM2P28161 218 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 CD70P32970 193 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 GRK3P35626 688 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 BDKRB1P46663 353 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 RNF144AP50876 292 aaPredicted RBP8.59□□□□□ -1.03
THBS3-201ENST00000368378 TMBIM6P55061 237 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 ACSM2AQ08AH3 577 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 PCBP2Q15366 365 aaKnown RBP eCLIP8.59□□□□□ -1.03
THBS3-201ENST00000368378 DGUOKQ16854 277 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 ADGRF1Q5T601 910 aa8.59□□□□□ -1.03
THBS3-201ENST00000368378 ACSM2BQ68CK6 577 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms