RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 PTPN18Q99952 460 aa16.32■□□□□ 0.2
NID1-202ENST00000366595 TREX2Q9BQ50 279 aaPredicted RBP16.32■□□□□ 0.2
NID1-202ENST00000366595 WDR18Q9BV38 432 aa16.32■□□□□ 0.2
NID1-202ENST00000366595 SYT4Q9H2B2 425 aa16.32■□□□□ 0.2
NID1-202ENST00000366595 FKBPLQ9UIM3 349 aa16.32■□□□□ 0.2
NID1-202ENST00000366595 NR2E3Q9Y5X4 410 aa16.32■□□□□ 0.2
NID1-202ENST00000366595 SLIT1O75093 1534 aa16.32■□□□□ 0.2
NID1-202ENST00000366595 MEIS2O14770 477 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 RNASEH2AO75792 299 aaKnown RBP16.31■□□□□ 0.2
NID1-202ENST00000366595 BLKP51451 505 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 PLA2G16P53816 162 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 LDB1Q86U70 411 aaPredicted RBP16.31■□□□□ 0.2
NID1-202ENST00000366595 PDSS2Q86YH6 399 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 PSD4Q8NDX1 1056 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 OR56A1Q8NGH5 318 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 TCTEX1D2Q8WW35 142 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 SLC25A36Q96CQ1 311 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 NLGN3Q9NZ94 848 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 SRRDQ9UH36 339 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 SPATA31A6Q5VVP1 1343 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 AGPSO00116 658 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 PRKYO43930 277 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 DNASE1P24855 282 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 OR1D2P34982 312 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 LUMP51884 338 aaPredicted RBP16.31■□□□□ 0.2
NID1-202ENST00000366595 INHBEP58166 350 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 CYP1B1Q16678 543 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 ZNF423Q2M1K9 1284 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 EEF1DP3Q658K8 133 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 PSRC1Q6PGN9 363 aaPredicted RBP16.31■□□□□ 0.2
NID1-202ENST00000366595 ANKRD23Q86SG2 305 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 CASTOR1Q8WTX7 329 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 ERVK-19Q9WJR5 959 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 CENPBD1B2RD01 187 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 FFAR2O15552 330 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 DGKGP49619 791 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 CDK6Q00534 326 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 SNTA1Q13424 505 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 HGSNATQ68CP4 663 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 BORAQ6PGQ7 559 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 CMTM7Q96FZ5 175 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 TMEM41AQ96HV5 264 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 MAF1Q9H063 256 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 TLR6Q9Y2C9 796 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 H0YAE9 185 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 EIF1AYO14602 144 aaKnown RBP16.31■□□□□ 0.2
NID1-202ENST00000366595 RBBP9O75884 186 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 RPP14O95059 124 aaKnown RBP16.31■□□□□ 0.2
NID1-202ENST00000366595 C7P10643 843 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 MAP2K3P46734 347 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 EIF1AXP47813 144 aaKnown RBP16.31■□□□□ 0.2
NID1-202ENST00000366595 LRIF1Q5T3J3 769 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 TSPAN33Q86UF1 283 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 PDZD9Q8IXQ8 264 aa16.31■□□□□ 0.2
NID1-202ENST00000366595 FBXO15Q8NCQ5 510 aaPredicted RBP16.31■□□□□ 0.2
NID1-202ENST00000366595 STBD1O95210 358 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 XRCC1P18887 633 aaPredicted RBP16.3■□□□□ 0.2
NID1-202ENST00000366595 AOC1P19801 751 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 ZNF792Q3KQV3 632 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 CARM1Q86X55 608 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 ITPKCQ96DU7 683 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 TTYH2Q9BSA4 534 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 C12orf65Q9H3J6 166 aaKnown RBP16.3■□□□□ 0.2
NID1-202ENST00000366595 ZFP57Q9NU63 452 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 COL20A1Q9P218 1284 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 PROM1O43490 865 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 OR2B3O76000 313 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 PLGP00747 810 aaPredicted RBP16.3■□□□□ 0.2
NID1-202ENST00000366595 TAL1P17542 331 aaPredicted RBP16.3■□□□□ 0.2
NID1-202ENST00000366595 PRKCHP24723 683 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 SGCBQ16585 318 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 CTC1Q2NKJ3 1217 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 SH3D19Q5HYK7 790 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 ZUFSPQ96AP4 578 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 RPF2Q9H7B2 306 aaKnown RBP16.3■□□□□ 0.2
NID1-202ENST00000366595 FOLH1BQ9HBA9 442 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 HCN4Q9Y3Q4 1203 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 GSK3BP49841 420 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 PLEKHG7Q6ZR37 379 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 B3GNT5Q9BYG0 378 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 MTG2Q9H4K7 406 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 ACSS2Q9NR19 701 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 C2orf92A0A1B0GVN3 265 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 A0A1W2PQ45 241 aaPredicted RBP16.3■□□□□ 0.2
NID1-202ENST00000366595 A0A1W2PQY0 241 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 HOXD8P13378 290 aaPredicted RBP16.3■□□□□ 0.2
NID1-202ENST00000366595 FXYD6P3P58550 94 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 CD47Q08722 323 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 AVL9Q8NBF6 648 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 FCRL5Q96RD9 977 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 HNRNPABQ99729 332 aaKnown RBP16.3■□□□□ 0.2
NID1-202ENST00000366595 MRIQ9BWK5 157 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 EIF5A2Q9GZV4 153 aaKnown RBP16.3■□□□□ 0.2
NID1-202ENST00000366595 C19orf12Q9NSK7 152 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 GNG8Q9UK08 70 aa16.3■□□□□ 0.2
NID1-202ENST00000366595 C1orf196B1AJZ1 125 aa16.29■□□□□ 0.2
NID1-202ENST00000366595 BCAS2O75934 225 aaPredicted RBP16.29■□□□□ 0.2
NID1-202ENST00000366595 THEGLP0DJG4 465 aa16.29■□□□□ 0.2
NID1-202ENST00000366595 CBSLP0DN79 551 aa16.29■□□□□ 0.2
NID1-202ENST00000366595 ALPPL2P10696 532 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms