RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 BIKQ13323 160 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 COLEC12Q5KU26 742 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 KCTD11Q693B1 232 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 KRT74Q7RTS7 529 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 IQCHQ86VS3 1027 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 LSMEM2Q8N112 164 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 PGBD5Q8N414 524 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 CCM2Q9BSQ5 444 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 ZSCAN5AQ9BUG6 496 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 OR51V1Q9H2C8 321 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 KAT8Q9H7Z6 458 aaKnown RBP13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 ITM2CQ9NQX7 267 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 C8orf4Q9NR00 106 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 PCDHGB3Q9Y5G1 929 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 NPIPB15A6NHN6 443 aaPredicted RBP13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 PDPK1O15530 556 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 PLOD3O60568 738 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 VIPP01282 170 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 DNAJB1P25685 340 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 VBP1P61758 197 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 SFSWAPQ12872 951 aaKnown RBP13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 DUOXA1Q1HG43 343 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 FAM131AQ6UXB0 335 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 RNF31Q96EP0 1072 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 EGLN2Q96KS0 407 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 RTP3Q9BQQ7 232 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 NDRG2Q9UN36 371 aaKnown RBP13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 PSIP1O75475 530 aaKnown RBP13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 RHOP08100 348 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 ALDOCP09972 364 aaKnown RBP13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 CPOXP36551 454 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 NCBP2P52298 156 aaKnown RBP eCLIP13.67□□□□□ -0.222e-11■■■■□ 22.3
PCMTD1-201ENST00000360540 LRRC32Q14392 662 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 TEAD4Q15561 434 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 PDCD4Q53EL6 469 aaKnown RBP13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 BEND5Q7L4P6 421 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 LRRC70Q7Z2Q7 622 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 ADGRG6Q86SQ4 1221 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 RNF130Q86XS8 419 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 ERI1Q8IV48 349 aaKnown RBP13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 FCRL4Q96PJ5 515 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 NKIRAS2Q9NYR9 191 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 ZNF282Q9UDV7 671 aaPredicted RBP13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 SEC16AO15027 2179 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 LAMB1P07942 1786 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 MITFO75030 526 aaPredicted RBP13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 ACRV1P26436 265 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 USP30Q70CQ3 517 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 LUZP2Q86TE4 346 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 HERVK_113Q902F9 699 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 MTRRQ9UBK8 725 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 EBF1Q9UH73 591 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 INSL6Q9Y581 213 aa13.67□□□□□ -0.22
PCMTD1-201ENST00000360540 A0A0J9YVX5 310 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 CBFA2T3O75081 653 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 TCEA1P23193 301 aaKnown RBP13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 DNAJA1P31689 397 aaKnown RBP13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 RFC2P35250 354 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 MAP2K4P45985 399 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 ERVK-21P61565 698 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 DOC2AQ14183 400 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 TIGD6Q17RP2 521 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 DPY19L1Q2PZI1 675 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 ATAT1Q5SQI0 421 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 RETREG3Q86VR2 466 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 DEPDC7Q96QD5 511 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 RANBP9Q96S59 729 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 SLC30A3Q99726 388 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 MGME1Q9BQP7 344 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 EFCAB11Q9BUY7 163 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 POLR2J2Q9GZM3 115 aaKnown RBP13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 NDEL1Q9GZM8 345 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 VAPAQ9P0L0 249 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 C5AR2Q9P296 337 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 CCNDBP1O95273 360 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 ITPKBP27987 946 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 GDI1P31150 447 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 ID2Q02363 134 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 ZNHIT3Q15649 155 aaPredicted RBP13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 MINDY4Q4G0A6 757 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 NCEH1Q6PIU2 408 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 NPAS3Q8IXF0 933 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 MARVELD2Q8N4S9 558 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 DTWD1Q8N5C7 304 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 ZUFSPQ96AP4 578 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 TRIM39Q9HCM9 518 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 STMN3Q9NZ72 180 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 SCN2BO60939 215 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 EFCAB14O75071 495 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 ALAS2P22557 587 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 LASP1Q14847 261 aaKnown RBP13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 NADSYN1Q6IA69 706 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 RFLNAQ6ZTI6 216 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 LINC01465Q8N7H1 131 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 GATA6Q92908 595 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 DIRAS2Q96HU8 199 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 WDR26Q9H7D7 661 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 SDR39U1Q9NRG7 319 aaPredicted RBP13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 ST14Q9Y5Y6 855 aa13.66□□□□□ -0.22
PCMTD1-201ENST00000360540 TTC3P53804 2025 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms