RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 MLC1Q15049 377 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 CRB2Q5IJ48 1285 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 PLPPR4Q7Z2D5 763 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 SLC7A5P1Q8MH63 180 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF676Q8N7Q3 588 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 TMBIM1Q969X1 311 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 NT5C1B-RDH14C9J2C7 533 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 K7EPI3 171 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 SCAMP3O14828 347 aaKnown RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 CXCR1P25024 350 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 YBEYP58557 167 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 PRPF38BQ5VTL8 546 aaKnown RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 OR8S1Q8NH09 359 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 STK35Q8TDR2 534 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 ARL6Q9H0F7 186 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 ALPPP05187 535 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 CTPS1P17812 591 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 PTPN6P29350 595 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 PLP2Q04941 152 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 MAD2L1BPQ15013 274 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 SPIN4Q56A73 249 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 EARS2Q5JPH6 523 aaKnown RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 CPA4Q9UI42 421 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 TLR4O00206 839 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 CHAF1BQ13112 559 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 ZACNQ401N2 412 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 CANT1Q8WVQ1 401 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 IRGQQ8WZA9 623 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 SMIM30A4D0T7 59 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 VEGFDO43915 354 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 ANXA8P13928 327 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 SLC6A6P31641 620 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 ALDH3B2P48448 385 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 PLGLB1Q02325 96 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 AURKBQ96GD4 344 aaPredicted RBP12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 SRMSQ9H3Y6 488 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 C14orf119Q9NWQ9 140 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 MGAT4CQ9UBM8 478 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 TNFRSF10DQ9UBN6 386 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 DNMT3AQ9Y6K1 912 aaPredicted RBP12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 LRRN3E7EW58 273 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 ARL6IP5O75915 188 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 TCEA1P23193 301 aaKnown RBP12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 PER3P56645 1201 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 HNRNPA0Q13151 305 aaKnown RBP12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 NOGQ13253 232 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 SFT2D3Q587I9 215 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 ATP6V1C2Q8NEY4 427 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 HERVK_113Q902F9 699 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 P2RY11Q96G91 374 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 TMEM109Q9BVC6 243 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 LRRN3Q9H3W5 708 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 PTGES2Q9H7Z7 377 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 IRF2P14316 349 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 STT3AP46977 705 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 ANKRD13BQ86YJ7 626 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 RAD9AQ99638 391 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 NDC1Q9BTX1 674 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 TM6SF2Q9BZW4 377 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 IPPKQ9H8X2 491 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 MDFIC2A0A1B0GVS7 189 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 NPIPA5E9PKD4 350 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 UBQLNLQ8IYU4 475 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 DEDD2Q8WXF8 326 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 BIRC8Q96P09 236 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 EBF4Q9BQW3 602 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 DNAJC5Q9H3Z4 198 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 NPIPA1Q9UND3 350 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 PTPRJQ12913 1337 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 HTR3EA5X5Y0 456 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 NPHS1O60500 1241 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 RFPL2O75678 378 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 FCER2P06734 321 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 ITGA5P08648 1049 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 SAMD7Q7Z3H4 446 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 IQCHQ86VS3 1027 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 GAL3ST4Q96RP7 486 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 TCEAL7Q9BRU2 100 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 ASPNQ9BXN1 380 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 SACM1LQ9NTJ5 587 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 E9PCH4 1651 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 DEFA6Q01524 100 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 FGL1Q08830 312 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 PDE12Q6L8Q7 609 aaKnown RBP12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 IRF2BP2Q7Z5L9 587 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 CASTOR1Q8WTX7 329 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 NCSTNQ92542 709 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 LRRC58Q96CX6 371 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 ZBTB45Q96K62 511 aaPredicted RBP12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 ZFP57Q9NU63 452 aa12.87□□□□□ -0.35
SRGAP3-201ENST00000360413 MT-CO2P00403 227 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 NUDT6P53370 316 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 CTBP2P56545 445 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 C1QTNF8P60827 252 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF674Q2M3X9 581 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 SLC15A3Q8IY34 581 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 LMLNQ96KR4 655 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 FCRL2Q96LA5 508 aaPredicted RBP12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 MRPS30Q9NP92 439 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms