RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 TIMP1P01033 207 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 RHOP08100 348 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ABCB1P08183 1280 aaPredicted RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 LAMP1P11279 417 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 COX7A2P14406 83 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SYN1P17600 705 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 POLR2EP19388 210 aaKnown RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 FPR1P21462 350 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 EEF1B2P24534 225 aaKnown RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 IGFBP5P24593 272 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ACVR2AP27037 513 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 HOXA9P31269 272 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 KDELR2P33947 212 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 PREPP48147 710 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 CLK3P49761 638 aaKnown RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 DAPP51397 102 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 GALK1P51570 392 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 PLA2G16P53816 162 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ITGA1P56199 1179 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ERVFC1P60507 584 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 VLDLRP98155 873 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 CDK5R2Q13319 367 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 NAE1Q13564 534 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 RAPSNQ13702 412 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 VEZF1Q14119 521 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 KEAP1Q14145 624 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SPIDRQ14159 915 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ZNF284Q2VY69 593 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ZNF805Q5CZA5 627 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 PRSS36Q5K4E3 855 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 LAIR1Q6GTX8 287 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ZCCHC8Q6NZY4 707 aaKnown RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 LIPIQ6XZB0 460 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SLC16A12Q6ZSM3 486 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 NLRP8Q86W28 1048 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 CROCCP3Q8IVE0 287 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 CHTF18Q8WVB6 975 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SORCS1Q8WY21 1168 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 TRIM43Q96BQ3 446 aaPredicted RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 COQ8BQ96D53 544 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 WDR34Q96EX3 536 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 NRBF2Q96F24 287 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 LRIG1Q96JA1 1093 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 MTERF1Q99551 399 aaKnown RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SPATA9Q9BWV2 254 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ADNPQ9H2P0 1102 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 MTG2Q9H4K7 406 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SIRT5Q9NXA8 310 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 TBC1D14Q9P2M4 693 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 IL36AQ9UHA7 158 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 BTNL2Q9UIR0 455 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 RPS6KA6Q9UK32 745 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 BLOC1S6Q9UL45 172 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 PCDHB11Q9Y5F2 797 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 HCFC2Q9Y5Z7 792 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 AP1M2Q9Y6Q5 423 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 HSPE1-MOB4S4R3N1 261 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SH3PXD2BA1X283 911 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 PSMD11O00231 422 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ATG13O75143 517 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 CATP04040 527 aaKnown RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ACRP10323 421 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 JUNDP17535 347 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 CCNA2P20248 432 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 IDSP22304 550 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 MAP4P27816 1152 aaKnown RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 CD6P30203 668 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 DNAJA1P31689 397 aaKnown RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 MAPK9P45984 424 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ASMTP46597 345 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 MVDP53602 400 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ACSM2AQ08AH3 577 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 GAB1Q13480 694 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 AQP6Q13520 282 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 C16orf72Q14CZ0 275 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SF1Q15637 639 aaKnown RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 LRRC26Q2I0M4 334 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 BCL7AQ4VC05 210 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ACSM2BQ68CK6 577 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 GALNT18Q6P9A2 607 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SLCO4C1Q6ZQN7 724 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 PARS2Q7L3T8 475 aaKnown RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 VTCN1Q7Z7D3 282 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 GALNT10Q86SR1 603 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 C1orf52Q8N6N3 182 aaKnown RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 VN1R2Q8NFZ6 395 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 OR7G3Q8NG95 312 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 ZFP90Q8TF47 636 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 LZICQ8WZA0 190 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 TMEM159Q96B96 161 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SH3KBP1Q96B97 665 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 OTUB2Q96DC9 234 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 HSH2DQ96JZ2 352 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 COQ10AQ96MF6 247 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SAMD11Q96NU1 681 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 PITX2Q99697 317 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 TCF25Q9BQ70 676 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 DPH2Q9BQC3 489 aaPredicted RBP6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 CCM2Q9BSQ5 444 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms