RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 MPPE1Q53F39 396 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 TJAP1Q5JTD0 557 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 BRWD3Q6RI45 1802 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 Q6ZVL8 140 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 B3GNT8Q7Z7M8 397 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 RBM23Q86U06 439 aaKnown RBP6.62□□□□□ -1.35
RTN4-203ENST00000357376 THOC6Q86W42 341 aaKnown RBP6.62□□□□□ -1.35
RTN4-203ENST00000357376 ANKRD13BQ86YJ7 626 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 DCAF4L2Q8NA75 395 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 C19orf18Q8NEA5 215 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 POP5Q969H6 163 aaKnown RBP6.62□□□□□ -1.35
RTN4-203ENST00000357376 TMEM203Q969S6 136 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 FEVQ99581 238 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 HEPHQ9BQS7 1158 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 OR51B5Q9H339 312 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 ELOVL2Q9NXB9 296 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 GPR83Q9NYM4 423 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 B4GALT6Q9UBX8 382 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 ENOPH1Q9UHY7 261 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 RIMKLBQ9ULI2 386 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 IGLV3-10A0A075B6K4 115 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 A0A0G2JN53 185 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 FAM92AA1XBS5 289 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.62□□□□□ -1.35
RTN4-203ENST00000357376 ERAL1O75616 437 aaKnown RBP6.62□□□□□ -1.35
RTN4-203ENST00000357376 SEC14L2O76054 403 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 AP2A2O94973 939 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 SNX4O95219 450 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 RETP07949 1114 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 ATP1B2P14415 290 aaPredicted RBP6.62□□□□□ -1.35
RTN4-203ENST00000357376 HOXB6P17509 224 aaKnown RBP6.62□□□□□ -1.35
RTN4-203ENST00000357376 ATF6P18850 670 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 PPP2R1BP30154 601 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 GSTM5P46439 218 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 CREMQ03060 361 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.62□□□□□ -1.352e-6■□□□□ 8.9
RTN4-203ENST00000357376 ST3GAL4Q11206 333 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 MRPL28Q13084 256 aaKnown RBP6.62□□□□□ -1.35
RTN4-203ENST00000357376 TRIQKQ629K1 86 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 CAPN13Q6MZZ7 669 aaPredicted RBP6.62□□□□□ -1.35
RTN4-203ENST00000357376 MED27Q6P2C8 311 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 SHQ1Q6PI26 577 aaKnown RBP6.62□□□□□ -1.35
RTN4-203ENST00000357376 TMEM220Q6QAJ8 160 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 FAM131AQ6UXB0 335 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 TPRG1Q6ZUI0 275 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 XAGE5Q8WWM1 108 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 AP2M1Q96CW1 435 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 Q96MT0 163 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 RNF38Q9H0F5 515 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 DSN1Q9H410 356 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 TRIM39Q9HCM9 518 aa6.62□□□□□ -1.35
RTN4-203ENST00000357376 NPIPB15A6NHN6 443 aaPredicted RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 FADS2P1A8MWK0 482 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 FAM25AB3EWG3 89 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 FAM25CB3EWG5 89 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 FAM25GB3EWG6 89 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 SLC28A2O43868 658 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 ATG13O75143 517 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 CCNB2O95067 398 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 C6orf47O95873 294 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 PRLP01236 227 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 NR2F1P10589 423 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 GADD45AP24522 165 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 UGT2B15P54855 530 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 RPS13P62277 151 aaKnown RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 SP3Q02447 781 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 ACVR1Q04771 509 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 TEAD4Q15561 434 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 PYDC2Q56P42 97 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 ZNF691Q5VV52 312 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 TMEM53Q6P2H8 277 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 AGTRAPQ6RW13 159 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 SERPINA13PQ6UXR4 307 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 CEP68Q76N32 757 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 NPAS3Q8IXF0 933 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 GPR26Q8NDV2 337 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 ST13P5Q8NFI4 369 aaPredicted RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 EXOSC8Q96B26 276 aaKnown RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 C1GALT1C1Q96EU7 318 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 OTUB1Q96FW1 271 aaPredicted RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 RHNO1Q9BSD3 238 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 RIOK2Q9BVS4 552 aaKnown RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 CLMPQ9H6B4 373 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 GPN2Q9H9Y4 310 aaPredicted RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 NTN4Q9HB63 628 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 RAD18Q9NS91 495 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 THG1LQ9NWX6 298 aaKnown RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 AHSPQ9NZD4 102 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 RGS17Q9UGC6 210 aaPredicted RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 ZNF221Q9UK13 617 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 NEU3Q9UQ49 428 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 CENPXA8MT69 81 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 NUDT7P0C024 238 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 CYBAP13498 195 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 ITIH1P19827 911 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 PSMA1P25786 263 aaKnown RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 TGFBR1P36897 503 aa6.61□□□□□ -1.35
RTN4-203ENST00000357376 BUD31P41223 144 aaPredicted RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 MAGEA10P43363 369 aaPredicted RBP6.61□□□□□ -1.35
RTN4-203ENST00000357376 GPR1P46091 355 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms