RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 FAM50BQ9Y247 325 aa7.62□□□□□ -1.19
CD46-203ENST00000354848 VPS9D1Q9Y2B5 631 aa7.62□□□□□ -1.19
CD46-203ENST00000354848 MRPL42Q9Y6G3 142 aaKnown RBP7.62□□□□□ -1.19
CD46-203ENST00000354848 DNMT3AQ9Y6K1 912 aaPredicted RBP7.62□□□□□ -1.19
CD46-203ENST00000354848 MROH6A6NGR9 719 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 KLK8O60259 260 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 C9P02748 559 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 CYP17A1P05093 508 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 FAM157BP0CG42 384 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 COL6A1P12109 1028 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 SLC2A4P14672 509 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 PTPRAP18433 802 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 CLCN7P51798 805 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 MAP2K6P52564 334 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 CLDN20P56880 219 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 MXD1Q05195 221 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.61□□□□□ -1.19
CD46-203ENST00000354848 BTN1A1Q13410 526 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ABRAXAS2Q15018 415 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 FAM187BQ17R55 369 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 WSCD2Q2TBF2 565 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 LIPIQ6XZB0 460 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ZNF551Q7Z340 670 aaPredicted RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 CTU1Q7Z7A3 348 aaKnown RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 ABI3BPQ7Z7G0 1075 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 FAM124AQ86V42 546 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 SLC44A2Q8IWA5 706 aaPredicted RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 KRTCAP2Q8N6L1 136 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 C9orf43Q8TAL5 461 aaPredicted RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 KLHL15Q96M94 604 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 OPALINQ96PE5 141 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 PPP1R2P1Q96PQ5 205 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 AARSD1Q9BTE6 412 aaKnown RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 DPY30Q9C005 99 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 NXF3Q9H4D5 531 aaKnown RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 HEXA-AS1Q9H8Q6 139 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 MCCC2Q9HCC0 563 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 HHATLQ9HCP6 504 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 RBFOX1Q9NWB1 397 aaKnown RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 MS4A12Q9NXJ0 267 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 NDRG2Q9UN36 371 aaKnown RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 ZNF451Q9Y4E5 1061 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 CFAP20Q9Y6A4 193 aaKnown RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 ZSWIM8A7E2V4 1837 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 A0A1W2PQL4 384 aaPredicted RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 M0R129 80 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 BTN3A1O00481 513 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 PCDH17O14917 1159 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 PLOD3O60568 738 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 GLP2RO95838 553 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 RAF1P04049 648 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 IL6P05231 212 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 TXNP10599 105 aaKnown RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 HOXB8P17481 243 aaPredicted RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 MAN2A2P49641 1150 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ITGA1P56199 1179 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 RAB25P57735 213 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 DMC1Q14565 340 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 PTPRCAPQ14761 206 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 TMEM132BQ14DG7 1078 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 FAM182BQ5T319 152 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ADGRG3Q86Y34 549 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ZZZ3Q8IYH5 903 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 CPA6Q8N4T0 437 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 LINC00469Q8N7U9 141 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ZNF431Q8TF32 576 aaPredicted RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 ZBED6CLQ96FA7 236 aaPredicted RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 FDXACB1Q9BRP7 624 aaPredicted RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 CDCA4Q9BXL8 241 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ULBP1Q9BZM6 244 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 SLC39A8Q9C0K1 460 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 MCOLN1Q9GZU1 580 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ATP13A1Q9HD20 1204 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 RNF19AQ9NV58 838 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ALPK3Q96L96 1907 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 PHIPQ8WWQ0 1821 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 FAM240BA0A1B0GVZ2 78 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 LCHNA4D1U4 455 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ZNF670-ZNF695F2Z2N8 137 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ESR1P03372 595 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 RRASP10301 218 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 TGFB3P10600 412 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 NPR3P17342 541 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 SOX3P41225 446 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 HK3P52790 923 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ABHD18Q0P651 414 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 CSTF3Q12996 717 aaKnown RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 SLC14A1Q13336 389 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 CLLU1Q5K131 121 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 GPR139Q6DWJ6 353 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 TLK2Q86UE8 772 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 PGBD3Q8N328 593 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 SLC37A3Q8NCC5 494 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 ATP6V1C2Q8NEY4 427 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 OR52H1Q8NGJ2 320 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 CREB3L4Q8TEY5 395 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 KLHL6Q8WZ60 621 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 RIT1Q92963 219 aa7.61□□□□□ -1.19
CD46-203ENST00000354848 PGAP3Q96FM1 320 aaPredicted RBP7.61□□□□□ -1.19
CD46-203ENST00000354848 TEPSINQ96N21 525 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms