RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 BDKRB1P46663 353 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 PREPP48147 710 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 VASPP50552 380 aaPredicted RBP21.38■■□□□ 1.01
UPF3A-201ENST00000351487 ARHGDIAP52565 204 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 RAE1P78406 368 aaKnown RBP21.38■■□□□ 1.01
UPF3A-201ENST00000351487 CCSMST1Q4G0I0 132 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 SYNPOQ8N3V7 929 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 BPIFB6Q8NFQ5 453 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 TANKQ92844 425 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 DUSP26Q9BV47 211 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 CHST8Q9H2A9 424 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 BTBD3Q9Y2F9 522 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 HSPE1-MOB4S4R3N1 261 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 SH3PXD2BA1X283 911 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 SOBPA7XYQ1 873 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 ETHE1O95571 254 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 SLC16A8O95907 504 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 SYN1P17600 705 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 XPAP23025 273 aaPredicted RBP21.37■■□□□ 1.01
UPF3A-201ENST00000351487 DNAJA1P31689 397 aaKnown RBP21.37■■□□□ 1.01
UPF3A-201ENST00000351487 CDK5R2Q13319 367 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 RAPSNQ13702 412 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 KEAP1Q14145 624 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 CAPN13Q6MZZ7 669 aaPredicted RBP21.37■■□□□ 1.01
UPF3A-201ENST00000351487 LILRA3Q8N6C8 439 aaPredicted RBP21.37■■□□□ 1.01
UPF3A-201ENST00000351487 OTUB2Q96DC9 234 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 BARD1Q99728 777 aaKnown RBP21.37■■□□□ 1.01
UPF3A-201ENST00000351487 TCF25Q9BQ70 676 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 TPT1P8Q9HAU6 139 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 PAK1IP1Q9NWT1 392 aaPredicted RBP21.37■■□□□ 1.01
UPF3A-201ENST00000351487 GALNT8Q9NY28 637 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 AP1M2Q9Y6Q5 423 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 MITFO75030 526 aaPredicted RBP21.37■■□□□ 1.01
UPF3A-201ENST00000351487 CPSF4O95639 269 aaKnown RBP21.37■■□□□ 1.01
UPF3A-201ENST00000351487 PTPN2P17706 415 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 VLDLRP98155 873 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 GTF2H3Q13889 308 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 SPIN4Q56A73 249 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 LIPIQ6XZB0 460 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 PIWIL3Q7Z3Z3 882 aaKnown RBP21.37■■□□□ 1.01
UPF3A-201ENST00000351487 C1orf52Q8N6N3 182 aaKnown RBP21.37■■□□□ 1.01
UPF3A-201ENST00000351487 CHTF18Q8WVB6 975 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 FOXJ1Q92949 421 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 FKBP10Q96AY3 582 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 SH3KBP1Q96B97 665 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 NODALQ96S42 347 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 PKP4Q99569 1192 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 FBXO10Q9UK96 956 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 PSME2Q9UL46 239 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 PCDHGB1Q9Y5G3 927 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 SNX5Q9Y5X3 404 aa21.37■■□□□ 1.01
UPF3A-201ENST00000351487 C1orf226A1L170 272 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 DPM1O60762 260 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 RFPL2O75678 378 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 RHOP08100 348 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 ACRP10323 421 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 ZNF182P17025 639 aaPredicted RBP21.36■■□□□ 1.01
UPF3A-201ENST00000351487 PCMT1P22061 227 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 PPIBP23284 216 aaKnown RBP21.36■■□□□ 1.01
UPF3A-201ENST00000351487 DAPP51397 102 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 TMEM115Q12893 351 aaPredicted RBP21.36■■□□□ 1.01
UPF3A-201ENST00000351487 C16orf72Q14CZ0 275 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 ZNF829Q3KNS6 432 aaPredicted RBP21.36■■□□□ 1.01
UPF3A-201ENST00000351487 ZNF658BQ4V348 819 aaPredicted RBP21.36■■□□□ 1.01
UPF3A-201ENST00000351487 OR7G3Q8NG95 312 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 HSH2DQ96JZ2 352 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 CORO2BQ9UQ03 480 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 ELFN1P0C7U0 828 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 PNLIPRP1P54315 467 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 ITGA1P56199 1179 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 ERVFC1P60507 584 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 VTCN1Q7Z7D3 282 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 ZC3H7AQ8IWR0 971 aaKnown RBP21.36■■□□□ 1.01
UPF3A-201ENST00000351487 NRSN1Q8IZ57 195 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 NAT16Q8N8M0 369 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 FBXO15Q8NCQ5 510 aaPredicted RBP21.36■■□□□ 1.01
UPF3A-201ENST00000351487 AP2M1Q96CW1 435 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 COQ8BQ96D53 544 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 FOPNLQ96NB1 174 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 DPH2Q9BQC3 489 aaPredicted RBP21.36■■□□□ 1.01
UPF3A-201ENST00000351487 WNT6Q9Y6F9 365 aa21.36■■□□□ 1.01
UPF3A-201ENST00000351487 GABRR3A8MPY1 467 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 HIDE1A8MVS5 230 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 PSMD11O00231 422 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 ABCB1P08183 1280 aaPredicted RBP21.35■■□□□ 1.01
UPF3A-201ENST00000351487 HTRA4P83105 476 aaPredicted RBP21.35■■□□□ 1.01
UPF3A-201ENST00000351487 IL5RAQ01344 420 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 BNIP3Q12983 259 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 SF1Q15637 639 aaKnown RBP21.35■■□□□ 1.01
UPF3A-201ENST00000351487 CPTPQ5TA50 214 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 ADNP2Q6IQ32 1131 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 RTL10Q7L3V2 364 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 GALNT5Q7Z7M9 940 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 GALNT10Q86SR1 603 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 HUS1BQ8NHY5 278 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 CDC26Q8NHZ8 85 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 BORCS5Q969J3 196 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 CSF3RQ99062 836 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 ASPSCR1Q9BZE9 553 aa21.35■■□□□ 1.01
UPF3A-201ENST00000351487 MTG2Q9H4K7 406 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms