RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 QPCTLQ9NXS2 382 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 TAS2R16Q9NYV7 291 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 USE1Q9NZ43 259 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 PNMA8BQ9ULN7 279 aaPredicted RBP5.84□□□□□ -1.48
CLCN3-201ENST00000347613 NAALAD2Q9Y3Q0 740 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 WNT6Q9Y6F9 365 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 GRXCR2A6NFK2 248 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 MYO1GB0I1T2 1018 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 RFXANKO14593 260 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 NUAK1O60285 661 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 SOCS5O75159 536 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 S100BP04271 92 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ABCB1P08183 1280 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 SERPINA4P29622 427 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 RGS4P49798 205 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 EPHB3P54753 998 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 SNRPNP63162 240 aaKnown RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 SLC7A9P82251 487 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 LSM11P83369 360 aaKnown RBP eCLIP5.83□□□□□ -1.484e-43■■■□□ 15.4
CLCN3-201ENST00000347613 OCA2Q04671 838 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 NAE1Q13564 534 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 LY6G5CQ5SRR4 150 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 CACHD1Q5VU97 1274 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 FRG2Q64ET8 278 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ATG9BQ674R7 924 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 DCDC5Q6ZRR9 648 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 EFL1Q7Z2Z2 1120 aaKnown RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 THOC6Q86W42 341 aaKnown RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 C8orf59Q8N0T1 100 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ZCCHC7Q8N3Z6 543 aaKnown RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 OR52J3Q8NH60 311 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 WDR48Q8TAF3 677 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ELMO1Q92556 727 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 DNASE1L2Q92874 299 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 MED8Q96G25 268 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 TMEM169Q96HH4 297 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 HSH2DQ96JZ2 352 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 FCRL1Q96LA6 429 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 FRG2BQ96QU4 278 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ING2Q9H160 280 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ELOVL6Q9H5J4 265 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 IL1RAPQ9NPH3 570 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 POLE4Q9NR33 117 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 KCTD5Q9NXV2 234 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 PLAGL1Q9UM63 463 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 SNX11Q9Y5W9 270 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 GNGT2O14610 69 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 SLC16A6O15403 523 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 IGSF6O95976 241 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 MT-ND2P03891 347 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 C8AP07357 584 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 RETP07949 1114 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 IGFBP1P08833 259 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 TYRP14679 529 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF8P17098 575 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 DBPQ10586 325 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ATP1A4Q13733 1029 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 DGCR6Q14129 220 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 GPR33Q49SQ1 333 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 DDX53Q86TM3 631 aaKnown RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 COMTD1Q86VU5 262 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF547Q8IVP9 402 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 SYNPOQ8N3V7 929 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 C1orf52Q8N6N3 182 aaKnown RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ARL10Q8N8L6 244 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 OR5AK3PQ8NH89 298 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ING5Q8WYH8 240 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 THAP11Q96EK4 314 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 REXO5Q96IC2 774 aaKnown RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 TPD52L3Q96J77 140 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ZFYVE19Q96K21 471 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 PANX1Q96RD7 426 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 NIPSNAP1Q9BPW8 284 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 WRAP53Q9BUR4 548 aaKnown RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 HERC2P3Q9BVR0 1158 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 CCDC90BQ9GZT6 254 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 ZBP1Q9H171 429 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 INIPQ9NRY2 104 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 SPATA6Q9NWH7 488 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 PKD2L2Q9NZM6 624 aa5.83□□□□□ -1.48
CLCN3-201ENST00000347613 STOX2Q9P2F5 926 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 NUP210Q8TEM1 1887 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-201ENST00000347613 NPIPB8E9PQR5 432 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 B4GALT2O60909 372 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SULT1C4O75897 302 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 FGF18O76093 207 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 HLA-EP13747 358 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 ETFAP13804 333 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SYN1P17600 705 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 GPX2P18283 190 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 CCNA2P20248 432 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 IDSP22304 550 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 KDELR2P33947 212 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 IRS1P35568 1242 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 KRT20P35900 424 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 TGFBR2P37173 567 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 RXRGP48443 463 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 WDR5P61964 334 aaKnown RBP5.82□□□□□ -1.48
CLCN3-201ENST00000347613 HBA1P69905 142 aa5.82□□□□□ -1.48
CLCN3-201ENST00000347613 SLC35A2P78381 396 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms