RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 PHEXP78562 749 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 MAD2L1BPQ15013 274 aaPredicted RBP14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 PDE12Q6L8Q7 609 aaKnown RBP14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 FAHD1Q6P587 224 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 Q6ZVU0 165 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 EIF3MQ7L2H7 374 aaKnown RBP14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 FAM9CQ8IZT9 166 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 LILRA3Q8N6C8 439 aaPredicted RBP14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 OR8J2Q8NGG1 315 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 SLC35B4Q969S0 331 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 C7orf34Q96L11 122 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 ZNF300Q96RE9 604 aaPredicted RBP14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 SIGLEC11Q96RL6 698 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 ZNF347Q96SE7 839 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 PCDH12Q9NPG4 1184 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 ERVW-1Q9UQF0 538 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 A0A1W2PQ67 120 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 EVPLLA8MZ36 301 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 GCM2O75603 506 aaPredicted RBP14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 COX7A2P14406 83 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 ITGA1P56199 1179 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 LSM3P62310 102 aaKnown RBP14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 CSTF3Q12996 717 aaKnown RBP14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 GAB1Q13480 694 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 DOC2AQ14183 400 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 METTL3Q86U44 580 aaKnown RBP14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 TTC29Q8NA56 475 aaPredicted RBP14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 ZFP90Q8TF47 636 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 POP5Q969H6 163 aaKnown RBP14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 TMEM169Q96HH4 297 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 ABHD8Q96I13 439 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 PCDH10Q9P2E7 1040 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 FAM8A1Q9UBU6 413 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 GMPPBQ9Y5P6 360 aa14.05□□□□□ -0.16
ARHGEF1-202ENST00000347545 C1orf226A1L170 272 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 SH3BGRLO75368 114 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 EPN2O95208 641 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 PARNO95453 639 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 CYP2A7P20853 494 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 HOXD10P28358 340 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 TGFBR1P36897 503 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 BCAP31P51572 246 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 C21orf58P58505 322 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 IFITM3Q01628 133 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 RELAQ04206 551 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 DDX39BQ13838 428 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 SNX29P2Q8IUI4 249 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 SETD9Q8NE22 299 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 ELMO1Q92556 727 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 ZNF558Q96NG5 402 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 SAMD11Q96NU1 681 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 VPS29Q9UBQ0 182 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 MTCL1Q9Y4B5 1905 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 LRRK1Q38SD2 2015 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 A0A1W2PRU2 124 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 FADS2P1A8MWK0 482 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 URODP06132 367 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 PORP16435 677 aaPredicted RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 AP1S2P56377 157 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 RAB15P59190 212 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 VBP1P61758 197 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 KCNJ10P78508 379 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 IRF8Q02556 426 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 SRSF11Q05519 484 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 CYP2A13Q16696 494 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 XKR6Q5GH73 641 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 SYT6Q5T7P8 510 aaPredicted RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 SLCO6A1Q86UG4 719 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 THOC6Q86W42 341 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 MFSD4AQ8N468 514 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 CDC26Q8NHZ8 85 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 MAL2Q969L2 176 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 ZNF689Q96CS4 500 aaPredicted RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 ALPK1Q96QP1 1244 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 RC3H2Q9HBD1 1191 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 TMEM184CQ9NVA4 438 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 FAM120CQ9NX05 1096 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 EXO1Q9UQ84 846 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 SAMHD1Q9Y3Z3 626 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 HSPE1-MOB4S4R3N1 261 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 PTPRSQ13332 1948 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 OR2AG2A6NM03 316 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 PCDHGA12O60330 932 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 SLCO2B1O94956 709 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 FADS2O95864 444 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 CXCR4P61073 352 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 CREMQ03060 361 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 CLCA4Q14CN2 919 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 LIPJQ5W064 366 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 TMEM236Q5W0B7 351 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 EGFLAMQ63HQ2 1017 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 FAM124AQ86V42 546 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 TMEM25Q86YD3 366 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 TMCO5AQ8N6Q1 288 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 PITX2Q99697 317 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 SLC46A2Q9BY10 475 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 THUMPD1Q9NXG2 353 aaKnown RBP14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 RPS6KA6Q9UK32 745 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 PCDHB11Q9Y5F2 797 aa14.04□□□□□ -0.16
ARHGEF1-202ENST00000347545 GABRR3A8MPY1 467 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms