RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 MMABQ96EY8 250 aaPredicted RBP15.04■□□□□ -0
TSPAN4-201ENST00000346501 SLC25A23Q9BV35 468 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 CAPS2Q9BXY5 557 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 DRC3Q9H069 523 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 SLC26A1Q9H2B4 701 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 ZNF71Q9NQZ8 489 aaPredicted RBP15.04■□□□□ -0
TSPAN4-201ENST00000346501 RUVBL1Q9Y265 456 aaKnown RBP15.04■□□□□ -0
TSPAN4-201ENST00000346501 MAU2Q9Y6X3 613 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 MGAQ8IWI9 3026 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 KCNE1BA0A087WTH5 132 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 CDC7O00311 574 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 SLC28A2O43868 658 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 H2AFYO75367 372 aaKnown RBP15.03■□□□□ -0
TSPAN4-201ENST00000346501 NPPBP16860 134 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 GCGRP47871 477 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 PGDP52209 483 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 PGGT1BP53609 377 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 CSNK1G2P78368 415 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 COL9A2Q14055 689 aaPredicted RBP15.03■□□□□ -0
TSPAN4-201ENST00000346501 FAM53BQ14153 422 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 TSNQ15631 228 aaKnown RBP15.03■□□□□ -0
TSPAN4-201ENST00000346501 UAP1Q16222 522 aaPredicted RBP15.03■□□□□ -0
TSPAN4-201ENST00000346501 RBBP7Q16576 425 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 NKG7Q16617 165 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 TMEM207Q6UWW9 146 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 ATG14Q6ZNE5 492 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 TAOK1Q7L7X3 1001 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 GPSM1Q86YR5 675 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 PLD3Q8IV08 490 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 SPNS2Q8IVW8 549 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 CEP97Q8IW35 865 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 TEX19Q8NA77 164 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 ADAMTS17Q8TE56 1095 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 CAB39LQ9H9S4 337 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 SEMA3GQ9NS98 782 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 ZDHHC18Q9NUE0 388 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 C14orf105Q9NVL8 296 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 ANAPC2Q9UJX6 822 aa15.03■□□□□ -0
TSPAN4-201ENST00000346501 PHGDHO43175 533 aaKnown RBP15.02■□□□□ -0
TSPAN4-201ENST00000346501 NRP2O60462 931 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 MMP11P24347 488 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 CXCR2P25025 360 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 ATP1A4Q13733 1029 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 DSG2Q14126 1118 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 HKDC1Q2TB90 917 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 CDKL4Q5MAI5 379 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 NIPAL1Q6NVV3 410 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 ASB18Q6ZVZ8 466 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 MRGPREQ86SM8 312 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 ASPGQ86U10 573 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 THOC6Q86W42 341 aaKnown RBP15.02■□□□□ -0
TSPAN4-201ENST00000346501 IFT20Q8IY31 132 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 NOA1Q8NC60 698 aaKnown RBP15.02■□□□□ -0
TSPAN4-201ENST00000346501 ABHD11Q8NFV4 315 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 SLC13A3Q8WWT9 602 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 SLC5A11Q8WWX8 675 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 AIF1LQ9BQI0 150 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 MCMBPQ9BTE3 642 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 CRB3Q9BUF7 120 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 NMRAL1Q9HBL8 299 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 ANKHQ9HCJ1 492 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 WWOXQ9NZC7 414 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 TRPC4Q9UBN4 977 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 RNF112Q9ULX5 631 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 TP53TG5Q9Y2B4 290 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 PCDHGB7Q9Y5F8 929 aa15.02■□□□□ -0
TSPAN4-201ENST00000346501 PCDHGA9Q9Y5G4 932 aaKnown RBP15.02■□□□□ -0
TSPAN4-201ENST00000346501 ANKRD12Q6UB98 2062 aa15.02□□□□□ -0.01
TSPAN4-201ENST00000346501 SPTA1P02549 2419 aa15.02□□□□□ -0.01
TSPAN4-201ENST00000346501 HEATR5BQ9P2D3 2071 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 PIEZO2Q9H5I5 2752 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 URADA6NGE7 173 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 PCDH17O14917 1159 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 OR1F1O43749 312 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 IPO13O94829 963 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 WDR47O94967 919 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 ALPPP05187 535 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 INHBAP08476 426 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 GNAZP19086 355 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 SLC26A3P40879 764 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 RGS1Q08116 209 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 KLRB1Q12918 225 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 CHAF1BQ13112 559 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 TGFBIQ15582 683 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 PPP1R3AQ16821 1122 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 PTRH1Q86Y79 214 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 HPS6Q86YV9 775 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 RELL1Q8IUW5 271 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 MFSD9Q8NBP5 474 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 STAG3L4Q8TBR4 150 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 STT3BQ8TCJ2 826 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 ANKRD49Q8WVL7 239 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 MRRFQ96E11 262 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 C10orf90Q96M02 699 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 SOX17Q9H6I2 414 aaPredicted RBP15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 PELI2Q9HAT8 420 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 PRM3Q9NNZ6 103 aa15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 MKKSQ9NPJ1 570 aaPredicted RBP15.01□□□□□ -0.01
TSPAN4-201ENST00000346501 ATP13A2Q9NQ11 1180 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms