RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 RAB43Q86YS6 212 aa18.89■□□□□ 0.61
CLTA-202ENST00000345519 DTWD1Q8N5C7 304 aa18.89■□□□□ 0.61
CLTA-202ENST00000345519 CSNK1A1LQ8N752 337 aa18.89■□□□□ 0.61
CLTA-202ENST00000345519 TMEM102Q8N9M5 508 aaPredicted RBP18.89■□□□□ 0.61
CLTA-202ENST00000345519 PTERQ96BW5 349 aa18.89■□□□□ 0.61
CLTA-202ENST00000345519 GPN3Q9UHW5 284 aaPredicted RBP18.89■□□□□ 0.61
CLTA-202ENST00000345519 NXT1Q9UKK6 140 aaKnown RBP18.89■□□□□ 0.61
CLTA-202ENST00000345519 NPEPPSL1A6NEC2 478 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 CD1DP15813 335 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 STMN1P16949 149 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 ALAS2P22557 587 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 SLC26A3P40879 764 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 FOLR3P41439 243 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 DSG2Q14126 1118 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 USP10Q14694 798 aaKnown RBP18.88■□□□□ 0.61
CLTA-202ENST00000345519 TGFBIQ15582 683 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 TSNQ15631 228 aaKnown RBP18.88■□□□□ 0.61
CLTA-202ENST00000345519 MLIPQ5VWP3 458 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 TMEM151BQ8IW70 566 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 C9orf43Q8TAL5 461 aaPredicted RBP18.88■□□□□ 0.61
CLTA-202ENST00000345519 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.88■□□□□ 0.61
CLTA-202ENST00000345519 RERGQ96A58 199 aaPredicted RBP18.88■□□□□ 0.61
CLTA-202ENST00000345519 PYCR2Q96C36 320 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 RHBDF1Q96CC6 855 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 ING2Q9H160 280 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 ACSS3Q9H6R3 686 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 ZNF304Q9HCX3 659 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 NINJ2Q9NZG7 142 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 CTSFQ9UBX1 484 aa18.88■□□□□ 0.61
CLTA-202ENST00000345519 MTRF1LQ9UGC7 380 aaKnown RBP18.88■□□□□ 0.61
CLTA-202ENST00000345519 PTRH2Q9Y3E5 179 aaKnown RBP18.88■□□□□ 0.61
CLTA-202ENST00000345519 A0A1W2PQ72 361 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 HMX2A2RU54 273 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 FOXS1O43638 330 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 ANXA5P08758 320 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 SLC35E2BP0CK96 405 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 SAT1P21673 171 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 GGT5P36269 586 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 SOX8P57073 446 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 ATP6V0D1P61421 351 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 SLC9A5Q14940 896 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 EFTUD2Q15029 972 aaKnown RBP eCLIP18.87■□□□□ 0.61
CLTA-202ENST00000345519 PPP1R32Q7Z5V6 425 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 CCDC91Q7Z6B0 441 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 CTAGE3PQ8IX95 158 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 PPM1NQ8N819 430 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 CEP112Q8N8E3 955 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 AMER3Q8N944 861 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 NEIL2Q969S2 332 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 TRIM44Q96DX7 344 aaPredicted RBP18.87■□□□□ 0.61
CLTA-202ENST00000345519 SCN2AQ99250 2005 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 FMO2Q99518 471 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 TGIF2Q9GZN2 237 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 CTNNAL1Q9UBT7 734 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 TLK1Q9UKI8 766 aa18.87■□□□□ 0.61
CLTA-202ENST00000345519 PABPN1LA6NDY0 278 aaKnown RBP18.86■□□□□ 0.61
CLTA-202ENST00000345519 MKRN2OSH3BPM6 223 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 PHGDHO43175 533 aaKnown RBP18.86■□□□□ 0.61
CLTA-202ENST00000345519 SUV39H1O43463 412 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 FAM155BO75949 473 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 DNAJB5O75953 348 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 GUCA1CO95843 209 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 EIF2S1P05198 315 aaKnown RBP18.86■□□□□ 0.61
CLTA-202ENST00000345519 CCDC166P0CW27 439 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 CDH1P12830 882 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 MMP11P24347 488 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 BCL6P41182 706 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 OR1D4P47884 311 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 SLC12A2P55011 1212 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 RRADP55042 308 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 NFATC3Q12968 1075 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 ATP1A4Q13733 1029 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 LACTB2Q53H82 288 aaPredicted RBP18.86■□□□□ 0.61
CLTA-202ENST00000345519 UBAP2Q5T6F2 1119 aaKnown RBP18.86■□□□□ 0.61
CLTA-202ENST00000345519 TMEM214Q6NUQ4 689 aaKnown RBP18.86■□□□□ 0.61
CLTA-202ENST00000345519 ADCK2Q7Z695 626 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 PLD3Q8IV08 490 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 PDPRQ8NCN5 879 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 ISL2Q96A47 359 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 KIAA1191Q96A73 305 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 CABS1Q96KC9 395 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 DRC3Q9H069 523 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 CDC42EP4Q9H3Q1 356 aaKnown RBP18.86■□□□□ 0.61
CLTA-202ENST00000345519 COPG2Q9UBF2 871 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 CDC14AQ9UNH5 594 aa18.86■□□□□ 0.61
CLTA-202ENST00000345519 TRBC2A0A5B9 178 aa18.85■□□□□ 0.61
CLTA-202ENST00000345519 CCDC189A1A4V9 331 aa18.85■□□□□ 0.61
CLTA-202ENST00000345519 PRPF4O43172 522 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLTA-202ENST00000345519 LCMT2O60294 686 aaKnown RBP18.85■□□□□ 0.61
CLTA-202ENST00000345519 IGHEP01854 428 aa18.85■□□□□ 0.61
CLTA-202ENST00000345519 PLA2G2AP14555 144 aa18.85■□□□□ 0.61
CLTA-202ENST00000345519 CCR8P51685 355 aa18.85■□□□□ 0.61
CLTA-202ENST00000345519 FOXL2P58012 376 aa18.85■□□□□ 0.61
CLTA-202ENST00000345519 SNRPNP63162 240 aaKnown RBP18.85■□□□□ 0.61
CLTA-202ENST00000345519 COL9A2Q14055 689 aaPredicted RBP18.85■□□□□ 0.61
CLTA-202ENST00000345519 TCAIMQ8N3R3 496 aa18.85■□□□□ 0.61
CLTA-202ENST00000345519 MFSD9Q8NBP5 474 aa18.85■□□□□ 0.61
CLTA-202ENST00000345519 SLC5A11Q8WWX8 675 aa18.85■□□□□ 0.61
CLTA-202ENST00000345519 CYTH2Q99418 400 aa18.85■□□□□ 0.61
CLTA-202ENST00000345519 PELI2Q9HAT8 420 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms