RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 XKR8Q9H6D3 395 aa10.35□□□□□ -0.75
ATXN3-201ENST00000340660 TRIM45Q9H8W5 580 aaPredicted RBP10.35□□□□□ -0.75
ATXN3-201ENST00000340660 PKD2L2Q9NZM6 624 aa10.35□□□□□ -0.75
ATXN3-201ENST00000340660 TMEM59LQ9UK28 342 aa10.35□□□□□ -0.75
ATXN3-201ENST00000340660 ING1Q9UK53 422 aaPredicted RBP10.35□□□□□ -0.75
ATXN3-201ENST00000340660 IGHV4-30-2A0A087WSY4 118 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 C1orf232A0A0U1RR37 186 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 FAM170AA1A519 330 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 RGSL1A5PLK6 1076 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 ARHGAP42A6NI28 874 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 C2orf81A6NN90 581 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 KLRC4-KLRK1H3BQV0 150 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 HEXBP07686 556 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 RPL13P26373 211 aaKnown RBP10.34□□□□□ -0.75
ATXN3-201ENST00000340660 AGFG1P52594 562 aaKnown RBP10.34□□□□□ -0.75
ATXN3-201ENST00000340660 ITGA8P53708 1063 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 GCNT1Q02742 428 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 FOXO1Q12778 655 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 TMEM115Q12893 351 aaPredicted RBP10.34□□□□□ -0.75
ATXN3-201ENST00000340660 TAZQ16635 292 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 CYB5R2Q6BCY4 276 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 HOOK3Q86VS8 718 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 NDUFAF2Q8N183 169 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 GPR26Q8NDV2 337 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 CAPZA3Q96KX2 299 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 MGME1Q9BQP7 344 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 EPB41L4BQ9H329 900 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 GALNT8Q9NY28 637 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 ACAD8Q9UKU7 415 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 COLEC10Q9Y6Z7 277 aa10.34□□□□□ -0.75
ATXN3-201ENST00000340660 A0A1B0GVC2 190 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 FAM166BA8MTA8 275 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 DDX3XO00571 662 aaKnown RBP eCLIP10.33□□□□□ -0.76
ATXN3-201ENST00000340660 IGHG3P01860 377 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 CCDC166P0CW27 439 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 TPP2P29144 1249 aaPredicted RBP10.33□□□□□ -0.76
ATXN3-201ENST00000340660 PBLDP30039 288 aaPredicted RBP10.33□□□□□ -0.76
ATXN3-201ENST00000340660 CYB561P49447 251 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 IL10RBQ08334 325 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 IHHQ14623 411 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 ZCWPW2Q504Y3 356 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 YOD1Q5VVQ6 348 aaPredicted RBP10.33□□□□□ -0.76
ATXN3-201ENST00000340660 TRILQ7L0X0 811 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 AMIGO1Q86WK6 493 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 TRAM1L1Q8N609 369 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 EMC1Q8N766 993 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 OR52E1Q8NGJ3 308 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 MARK4Q96L34 752 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 LYSMD1Q96S90 227 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 ZSCAN5AQ9BUG6 496 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 SCAND2PQ9GZW5 306 aaPredicted RBP10.33□□□□□ -0.76
ATXN3-201ENST00000340660 ASB8Q9H765 288 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 EML4Q9HC35 981 aaKnown RBP10.33□□□□□ -0.76
ATXN3-201ENST00000340660 EXOC1Q9NV70 894 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 DNPEPQ9ULA0 475 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 NFS1Q9Y697 457 aa10.33□□□□□ -0.76
ATXN3-201ENST00000340660 A0A0J9YY10 115 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 PINLYPA6NC86 204 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 AQP7O14520 342 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 MATN3O15232 486 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 SLC16A3O15427 465 aaKnown RBP10.32□□□□□ -0.76
ATXN3-201ENST00000340660 PEX11BO96011 259 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 IGHV4-39P01824 125 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 EPB41P11171 864 aaKnown RBP10.32□□□□□ -0.76
ATXN3-201ENST00000340660 GABRA1P14867 456 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 HNF1AP20823 631 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 PPIAP62937 165 aaKnown RBP10.32□□□□□ -0.76
ATXN3-201ENST00000340660 KRT33BQ14525 404 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 GRM7Q14831 915 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 C2CD6Q53TS8 623 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 WLSQ5T9L3 541 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 GARNL3Q5VVW2 1013 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 C22orf34Q6ZV56 151 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 BRAPQ7Z569 592 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 SLC5A8Q8N695 610 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 IQUBQ8NA54 791 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 NUP43Q8NFH3 380 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 SLC35C1Q96A29 364 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 REPS1Q96D71 796 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 ART5Q96L15 291 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 SPATA32Q96LK8 384 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 MIPEPQ99797 713 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 WDR83Q9BRX9 315 aaKnown RBP10.32□□□□□ -0.76
ATXN3-201ENST00000340660 RBM24Q9BX46 236 aaKnown RBP10.32□□□□□ -0.76
ATXN3-201ENST00000340660 TFB2MQ9H5Q4 396 aaKnown RBP10.32□□□□□ -0.76
ATXN3-201ENST00000340660 CDCP1Q9H5V8 836 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 SPHK1Q9NYA1 384 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 KCNS2Q9ULS6 477 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 KLHL20Q9Y2M5 609 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 SACSQ9NZJ4 4579 aa10.32□□□□□ -0.76
ATXN3-201ENST00000340660 FITM1A5D6W6 292 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 OVOL3O00110 214 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 DFFAO00273 331 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 KIAA0513O60268 411 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 PRLP01236 227 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 FBLP22087 321 aaKnown RBP10.31□□□□□ -0.76
ATXN3-201ENST00000340660 SNX16P57768 344 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 LOXL1Q08397 574 aaPredicted RBP10.31□□□□□ -0.76
ATXN3-201ENST00000340660 GTF2H3Q13889 308 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 VAX1Q5SQQ9 334 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms