RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 GRK3P35626 688 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 PGDP52209 483 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 CSNK1G2P78368 415 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 OCA2Q04671 838 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 PPP1R3AQ16821 1122 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 CTAGE3PQ8IX95 158 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 PYCR2Q96C36 320 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 RBBP8Q99708 897 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 LRRC4CQ9HCJ2 640 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 P4HTMQ9NXG6 502 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 ZNF282Q9UDV7 671 aaPredicted RBP26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 SH2B3Q9UQQ2 575 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 NPEPPSL1A6NEC2 478 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 VSTM2BA6NLU5 285 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 CDC7O00311 574 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 CEACAM4O75871 244 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 CDH1P12830 882 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 FBLP22087 321 aaKnown RBP26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 MMP11P24347 488 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 GUCY2DQ02846 1103 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 KLRB1Q12918 225 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 USP10Q14694 798 aaKnown RBP26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 NDUFA9Q16795 377 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 ZXDCQ2QGD7 858 aaPredicted RBP26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 GLE1Q53GS7 698 aaKnown RBP26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 PPP1R32Q7Z5V6 425 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 ANKRD49Q8WVL7 239 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 GPR22Q99680 433 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 MLXIPLQ9NP71 852 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 CTNNAL1Q9UBT7 734 aa26.3■■□□□ 1.8
ATPAF1-201ENST00000329231 P2RX6O15547 441 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 CDKL1Q00532 357 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 DSG2Q14126 1118 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 KBTBD12Q3ZCT8 623 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 DCAF10Q5QP82 559 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 ADAMTSL2Q86TH1 951 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 TEX19Q8NA77 164 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 CLEC1AQ8NC01 280 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 FAM129AQ9BZQ8 928 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 DRC3Q9H069 523 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 SOX17Q9H6I2 414 aaPredicted RBP26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 OARD1Q9Y530 152 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 PCDHGB7Q9Y5F8 929 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 ANKRD12Q6UB98 2062 aa26.29■■□□□ 1.8
ATPAF1-201ENST00000329231 CCDC88CQ9P219 2028 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 C1QAP02745 245 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 ANXA5P08758 320 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 STMN1P16949 149 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 SPRP35270 261 aaPredicted RBP26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 CASRP41180 1078 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 CCR8P51685 355 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 FAM53BQ14153 422 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 GRTP1Q5TC63 336 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 FRA10AC1Q70Z53 315 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 TMEM151BQ8IW70 566 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 ARHGEF39Q8N4T4 335 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 PPM1NQ8N819 430 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 ABHD11Q8NFV4 315 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 STT3BQ8TCJ2 826 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 FBF1Q8TES7 1133 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 MIEF2Q96C03 454 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 DERL2Q9GZP9 239 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 CAB39LQ9H9S4 337 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 SEMA3GQ9NS98 782 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 ZDHHC18Q9NUE0 388 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 BSNQ9UPA5 3926 aa26.28■■□□□ 1.8
ATPAF1-201ENST00000329231 MDC1Q14676 2089 aaKnown RBP26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 MED13Q9UHV7 2174 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 A6NL46 340 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 AGPSO00116 658 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 PDGFAP04085 211 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 ZGLP1P0C6A0 271 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 NAB1Q13506 487 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 TSNQ15631 228 aaKnown RBP26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 SHISA6Q6ZSJ9 500 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 VN1R4Q7Z5H5 301 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 CAMKVQ8NCB2 501 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 FDCSPQ8NFU4 85 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 MMABQ96EY8 250 aaPredicted RBP26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 VPS50Q96JG6 964 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 OR4K3Q96R72 315 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 EGFL8Q99944 293 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 GPR83Q9NYM4 423 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 DMGDHQ9UI17 866 aaKnown RBP26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 ZNF451Q9Y4E5 1061 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 BAHCC1Q9P281 2608 aa26.27■■□□□ 1.8
ATPAF1-201ENST00000329231 IGLV3-12A0A075B6K2 115 aa26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 FEZF1A0PJY2 475 aa26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 WISP3O95389 354 aaPredicted RBP26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 SLC26A3P40879 764 aa26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 BCL6P41182 706 aa26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 HNMTP50135 292 aa26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 CEP128Q6ZU80 1094 aa26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 TBC1D19Q8N5T2 526 aa26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 OR4K1Q8NGD4 311 aa26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 CRB3Q9BUF7 120 aa26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 YIPF2Q9BWQ6 316 aa26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 TRPC4Q9UBN4 977 aa26.26■■□□□ 1.79
ATPAF1-201ENST00000329231 A0A0A6YYC8 382 aaPredicted RBP26.25■■□□□ 1.79
ATPAF1-201ENST00000329231 I3L1I5 382 aaPredicted RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms