RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 CD93Q9NPY3 652 aa10.29□□□□□ -0.76
CUL4A-201ENST00000326335 MIEF1Q9NQG6 463 aa10.29□□□□□ -0.76
CUL4A-201ENST00000326335 PDP1Q9P0J1 537 aaPredicted RBP10.29□□□□□ -0.76
CUL4A-201ENST00000326335 FAF1Q9UNN5 650 aaPredicted RBP10.29□□□□□ -0.76
CUL4A-201ENST00000326335 CCL27Q9Y4X3 112 aa10.29□□□□□ -0.76
CUL4A-201ENST00000326335 TRBV5-4A0A0C4DH59 114 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TCRBV5S2A0A599 114 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 GABRR3A8MPY1 467 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 H3BNH8 94 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 ZNF197O14709 1029 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 ACOX3O15254 700 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 MAGEB3O15480 346 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 SGTAO43765 313 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 GPIP06744 558 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 CYBRD1Q53TN4 286 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 CEP68Q76N32 757 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 NAGSQ8N159 534 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 GALNT15Q8N3T1 639 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 PSD4Q8NDX1 1056 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 ZNF548Q8NEK5 533 aaPredicted RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 VANGL1Q8TAA9 524 aaPredicted RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 OR8D1Q8WZ84 308 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 REXO5Q96IC2 774 aaKnown RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 ZNF641Q96N77 438 aaPredicted RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 CCM2Q9BSQ5 444 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 DUSP26Q9BV47 211 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TMEM245Q9H330 911 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 RMND5AQ9H871 391 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 NTN4Q9HB63 628 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 VCX3AQ9NNX9 186 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TBC1D14Q9P2M4 693 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 FZD4Q9ULV1 537 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 DYRK1BQ9Y463 629 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 WDFY3Q8IZQ1 3526 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 ADH1CP00326 375 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 C8GP07360 202 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 RAP2AP10114 183 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 BMP2P12643 396 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 AMD1P17707 334 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 GGT1P19440 569 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 RPS3P23396 243 aaKnown RBP eCLIP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 NR1H2P55055 460 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 EEFSECP57772 596 aaKnown RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TP53BP2Q13625 1128 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 C8orf82Q6P1X6 216 aaPredicted RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 KLHL17Q6TDP4 642 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 R3HCC1LQ7Z5L2 792 aaKnown RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 SNX29P2Q8IUI4 249 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 VOPP1Q96AW1 172 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 ECHDC3Q96DC8 303 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 FCRL4Q96PJ5 515 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 PBX4Q9BYU1 374 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TPT1P8Q9HAU6 139 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 PADI4Q9UM07 663 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TBC1D3DA0A087WVF3 549 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TBC1D3IA0A087WXS9 549 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TBC1D3EA0A087X179 549 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TBC1D3KA0A087X1G2 549 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TBC1D3FA6NER0 549 aaPredicted RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 ANKDD1BA6NHY2 528 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TBC1D3LB9A6J9 549 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 IL6P05231 212 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TBC1D3HP0C7X1 549 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 PABPC4LP0CB38 370 aaKnown RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 CAPGP40121 348 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 RPL26P61254 145 aaKnown RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 BNIP3Q12983 259 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 SPDYE7PQ495Y7 208 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 MPP7Q5T2T1 576 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 LYPLAL1Q5VWZ2 237 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TBC1D3GQ6DHY5 549 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TBC1D3CQ6IPX1 549 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 ABRAXAS1Q6UWZ7 409 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 CARM1Q86X55 608 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 FAM129CQ86XR2 697 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 TBC1D3Q8IZP1 549 aaPredicted RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 NELL1Q92832 810 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 COL26A1Q96A83 441 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 THAP11Q96EK4 314 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 KCNC2Q96PR1 638 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 SMAD5Q99717 465 aaKnown RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 CXorf21Q9HAI6 301 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 EQTNQ9NQ60 294 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 THG1LQ9NWX6 298 aaKnown RBP10.28□□□□□ -0.76
CUL4A-201ENST00000326335 PCDHGA8Q9Y5G5 932 aa10.28□□□□□ -0.76
CUL4A-201ENST00000326335 J3KTA2 159 aa10.27□□□□□ -0.77
CUL4A-201ENST00000326335 ADRB3P13945 408 aa10.27□□□□□ -0.77
CUL4A-201ENST00000326335 ZNF182P17025 639 aaPredicted RBP10.27□□□□□ -0.77
CUL4A-201ENST00000326335 MAP2K4P45985 399 aa10.27□□□□□ -0.77
CUL4A-201ENST00000326335 CLDN2P57739 230 aa10.27□□□□□ -0.77
CUL4A-201ENST00000326335 VLDLRP98155 873 aa10.27□□□□□ -0.77
CUL4A-201ENST00000326335 MAD2L1Q13257 205 aaPredicted RBP10.27□□□□□ -0.77
CUL4A-201ENST00000326335 GAB1Q13480 694 aa10.27□□□□□ -0.77
CUL4A-201ENST00000326335 KIAA0040Q15053 153 aa10.27□□□□□ -0.77
CUL4A-201ENST00000326335 RPS26P11Q5JNZ5 115 aaPredicted RBP10.27□□□□□ -0.77
CUL4A-201ENST00000326335 FGD3Q5JSP0 725 aa10.27□□□□□ -0.77
CUL4A-201ENST00000326335 CWF19L1Q69YN2 538 aaKnown RBP10.27□□□□□ -0.77
CUL4A-201ENST00000326335 TTC23LQ6PF05 361 aa10.27□□□□□ -0.77
CUL4A-201ENST00000326335 NPAS3Q8IXF0 933 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms