RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CREG1O75629 220 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 CPSF4O95639 269 aaKnown RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 APODP05090 189 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 HSD3B1P14060 373 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 HSD3B2P26439 372 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 RPL10P27635 214 aaKnown RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 MTHFRP42898 656 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 SEC13P55735 322 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 CDK3Q00526 305 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 PCDH1Q08174 1060 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 MTAPQ13126 283 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 MAP7Q14244 749 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 NKG7Q16617 165 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 DPY19L1Q2PZI1 675 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 ATAT1Q5SQI0 421 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 AGBL4Q5VU57 503 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 TBPL2Q6SJ96 375 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 EP400NLQ6ZTU2 488 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 SPRED1Q7Z699 444 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 HDDC3Q8N4P3 179 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 PNPT1Q8TCS8 783 aaKnown RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 CYGBQ8WWM9 190 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 TFGQ92734 400 aaPredicted RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 KLK6Q92876 244 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 FCRL1Q96LA6 429 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 TRAPPC9Q96Q05 1148 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 CDCA3Q99618 268 aaPredicted RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 NRTNQ99748 197 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 OR52A5Q9H2C5 316 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 ZNF696Q9H7X3 374 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 NTN4Q9HB63 628 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 CCDC177Q9NQR7 707 aaPredicted RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 MBNL1Q9NR56 388 aaKnown RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 MAGED1Q9Y5V3 778 aaPredicted RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 GABRR3A8MPY1 467 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 CLIC1O00299 241 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 SOX1O00570 391 aaPredicted RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 YY2O15391 372 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 SCN2BO60939 215 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 SEC24DO94855 1032 aaPredicted RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 SCELO95171 688 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 C1GALT1C1LP0DN25 315 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 PCSK2P16519 638 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 TIE1P35590 1138 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 RPS9P46781 194 aaKnown RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 PNLIPRP1P54315 467 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 WNT3P56703 355 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 RAE1P78406 368 aaKnown RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 HYAL1Q12794 435 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 PON2Q15165 354 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 DUOXA1Q1HG43 343 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 ITPRIPL2Q3MIP1 535 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 SDE2Q6IQ49 451 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 ZNF551Q7Z340 670 aaPredicted RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 KLHDC8AQ8IYD2 350 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 ZNF740Q8NDX6 193 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 OR8J2Q8NGG1 315 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 CHTF18Q8WVB6 975 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 NELL1Q92832 810 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 RAD51AP1Q96B01 352 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 SH3KBP1Q96B97 665 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 REPS1Q96D71 796 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 COX14Q96I36 57 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 HHIPQ96QV1 700 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 TSC22D3Q99576 134 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 TRMT61BQ9BVS5 477 aaKnown RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 SGPP1Q9BX95 441 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 LMAN2LQ9H0V9 348 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 SPNS1Q9H2V7 528 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 OR51B5Q9H339 312 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 SOX17Q9H6I2 414 aaPredicted RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 OLAHQ9NV23 265 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 SH3BP4Q9P0V3 963 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 AP3M1Q9Y2T2 418 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 ZFC3H1O60293 1989 aaKnown RBP7.3□□□□□ -1.24
IFT88-201ENST00000319980 PIPSLA2A3N6 862 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 GNGT2O14610 69 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 PRMT3O60678 531 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 OR6B1O95007 311 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 H6PDO95479 791 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 SERPINA1P01009 418 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 CST1P01037 141 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 PABPC4LP0CB38 370 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 LAMP2P13473 410 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 HOXB9P17482 250 aaPredicted RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 ENGP17813 658 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 EIF2DP41214 584 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 RPL5P46777 297 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 IST1P53990 364 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 LAPTM5Q13571 262 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 RBBP5Q15291 538 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 SPIN4Q56A73 249 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 PAGE2BQ5JRK9 111 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 CPTPQ5TA50 214 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 ANKRD54Q6NXT1 300 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 ZCCHC8Q6NZY4 707 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 ADAMTSL4Q6UY14 1074 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 STK32CQ86UX6 486 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 LRRTM4Q86VH4 590 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 CALHM3Q86XJ0 350 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms