RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 MICAL3Q7RTP6 2002 aa10.81□□□□□ -0.68
PTPN7-201ENST00000309017 AP3D1O14617 1153 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 MRPS14O60783 128 aaKnown RBP10.8□□□□□ -0.68
PTPN7-201ENST00000309017 CDK1P06493 297 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 ADORA3P0DMS8 318 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 CRATP43155 626 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 MAGEA2P43356 314 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 OR1E2P47887 323 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 RGS6P49758 472 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 TSTA3Q13630 321 aaPredicted RBP10.8□□□□□ -0.68
PTPN7-201ENST00000309017 DUOXA1Q1HG43 343 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 CERS6Q6ZMG9 384 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 EIF3MQ7L2H7 374 aaKnown RBP10.8□□□□□ -0.68
PTPN7-201ENST00000309017 GALNT13Q8IUC8 556 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 ZZZ3Q8IYH5 903 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 CYP4Z2PQ8N1L4 340 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 DEPDC4Q8N2C3 294 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 RNF175Q8N4F7 328 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 CARNMT1Q8N4J0 409 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 KIAA1958Q8N8K9 716 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 PDFQ9HBH1 243 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 MS4A12Q9NXJ0 267 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 QPCTLQ9NXS2 382 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 PSORS1C1Q9UIG5 152 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 PPT2Q9UMR5 302 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 PCDHB8Q9UN66 801 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 ACSL4O60488 711 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 BMP1P13497 986 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 ACVR2AP27037 513 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 MXD1Q05195 221 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 LRRC26Q2I0M4 334 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 CYP27C1Q4G0S4 372 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 FBXO43Q4G163 708 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 SNAP47Q5SQN1 464 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 DNAJC22Q8N4W6 341 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 BEND7Q8N7W2 519 aaPredicted RBP10.8□□□□□ -0.68
PTPN7-201ENST00000309017 CITED4Q96RK1 184 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 TIGARQ9NQ88 270 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 PLK4O00444 970 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 NUDT7P0C024 238 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 SLC6A4P31645 630 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 HNF4AP41235 474 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 DSC3Q14574 896 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 STARD3Q14849 445 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 TAF12Q16514 161 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 LRIF1Q5T3J3 769 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 ARMC12Q5T9G4 340 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 NXNL2Q5VZ03 156 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 TMPRSS11AQ6ZMR5 421 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 TRIM46Q7Z4K8 759 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 ZNF280BQ86YH2 543 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 SLC5A8Q8N695 610 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 IL17RDQ8NFM7 739 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 APH1BQ8WW43 257 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 SPATA17Q96L03 361 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 NEDD4LQ96PU5 975 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 ATG10Q9H0Y0 220 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 TPT1P8Q9HAU6 139 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 SNTG1Q9NSN8 517 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 FZD4Q9ULV1 537 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 FCF1Q9Y324 198 aaKnown RBP10.8□□□□□ -0.68
PTPN7-201ENST00000309017 PRSS21Q9Y6M0 314 aa10.8□□□□□ -0.68
PTPN7-201ENST00000309017 TRBV5-3A0A0A0MS03 114 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 GFRA2O00451 464 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 PRAMEF12O95522 483 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 MZF1P28698 734 aaPredicted RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 TIE1P35590 1138 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 ITGA1P56199 1179 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 BOP1Q14137 746 aaKnown RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 PPP2R2DQ66LE6 453 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 LGI4Q8N135 537 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 VPS37AQ8NEZ2 397 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 SH3KBP1Q96B97 665 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 HRASLS5Q96KN8 279 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 CEP295NLQ96MC4 621 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 COPS8Q99627 209 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 MGLLQ99685 303 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 HOXC11O43248 304 aaPredicted RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 SLITRK5O94991 958 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 KCNK5O95279 499 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 IL1RNP18510 177 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 CRISP3P54108 245 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 CDH4P55283 916 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 ACSM2AQ08AH3 577 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 ACSM2BQ68CK6 577 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 GDF6Q6KF10 455 aaPredicted RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 UBE2R2Q712K3 238 aaPredicted RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 SERPINA11Q86U17 422 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 ASIC4Q96FT7 647 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 C8orf48Q96LL4 319 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 UROC1Q96N76 676 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 VPS35Q96QK1 796 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 MTERF1Q99551 399 aaKnown RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 CCDC59Q9P031 241 aaKnown RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 IL17CQ9P0M4 197 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 KDELR3O43731 214 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 CHRM5P08912 532 aaPredicted RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 GGT2P36268 569 aa10.79□□□□□ -0.68
PTPN7-201ENST00000309017 ATP5C1P36542 298 aaKnown RBP10.79□□□□□ -0.68
PTPN7-201ENST00000309017 HTR3AP46098 478 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms