RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 HSPB11Q9Y547 144 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 NRAPQ86VF7 1730 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 NUP214P35658 2090 aaPredicted RBP13.07□□□□□ -0.32
SEC23A-201ENST00000307712 FAM92AA1XBS5 289 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 FZD9O00144 591 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 SAP18O00422 153 aaKnown RBP13.07□□□□□ -0.32
SEC23A-201ENST00000307712 SGTAO43765 313 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 GABARAPO95166 117 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 NR2F1P10589 423 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 OR1D2P34982 312 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 FEN1P39748 380 aaKnown RBP13.07□□□□□ -0.32
SEC23A-201ENST00000307712 ZNF157P51786 506 aaPredicted RBP13.07□□□□□ -0.32
SEC23A-201ENST00000307712 GP2P55259 537 aaKnown RBP13.07□□□□□ -0.32
SEC23A-201ENST00000307712 AAK1Q2M2I8 961 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 ZSWIM9Q86XI8 627 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 AQP11Q8NBQ7 271 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 ZNF548Q8NEK5 533 aaPredicted RBP13.07□□□□□ -0.32
SEC23A-201ENST00000307712 ARRDC2Q8TBH0 407 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 RAD18Q9NS91 495 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 AHSPQ9NZD4 102 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 STRCP1A6NGW2 1772 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 SLC30A4O14863 429 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 GBAP04062 536 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 ERAP2Q6P179 960 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 TRAPPC5Q8IUR0 188 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 FAM83FQ8NEG4 500 aaPredicted RBP13.07□□□□□ -0.32
SEC23A-201ENST00000307712 NPLOC4Q8TAT6 608 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 RASSF5Q8WWW0 418 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 FRMD6Q96NE9 622 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 BRINP2Q9C0B6 783 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 HEBP1Q9NRV9 189 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 GPRC5BQ9NZH0 403 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 CLEC4AQ9UMR7 237 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 BOLA1Q9Y3E2 137 aa13.07□□□□□ -0.32
SEC23A-201ENST00000307712 BTAF1O14981 1849 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.06□□□□□ -0.32
SEC23A-201ENST00000307712 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.06□□□□□ -0.32
SEC23A-201ENST00000307712 CNMDO75829 334 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 TSPAN9O75954 239 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 SDC2P34741 201 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 NSG1P42857 185 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 PTSQ03393 145 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 PROX2Q3B8N5 592 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 RUNDC3AQ59EK9 446 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 SDE2Q6IQ49 451 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 RBM23Q86U06 439 aaKnown RBP13.06□□□□□ -0.32
SEC23A-201ENST00000307712 SLC29A3Q9BZD2 475 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.06□□□□□ -0.32
SEC23A-201ENST00000307712 POLR2J3Q9H1A7 115 aaKnown RBP13.06□□□□□ -0.32
SEC23A-201ENST00000307712 TBC1D17Q9HA65 648 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 SEMA3GQ9NS98 782 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 TMEM30AQ9NV96 361 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 CLCA2Q9UQC9 943 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 HSPE1-MOB4S4R3N1 261 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 OR6C75A6NL08 312 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 MPZL2O60487 215 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 CA5AP35218 305 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 TGFBR1P36897 503 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 FCGRTP55899 365 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 ISL1P61371 349 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 ZXDBP98169 803 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 SCARB2Q14108 478 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 NOXRED1Q6NXP6 359 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 TNFAIP8L2Q6P589 184 aaPredicted RBP13.06□□□□□ -0.32
SEC23A-201ENST00000307712 C16orf62Q7Z3J2 963 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 CLECL1Q8IZS7 167 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 METTL4Q8N3J2 472 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 C2orf73Q8N5S3 287 aaPredicted RBP13.06□□□□□ -0.32
SEC23A-201ENST00000307712 OR4K1Q8NGD4 311 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 XAGE5Q8WWM1 108 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 MAL2Q969L2 176 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 FUBP3Q96I24 572 aaKnown RBP eCLIP13.06□□□□□ -0.326e-16■■■■□ 20.8
SEC23A-201ENST00000307712 NKIRAS2Q9NYR9 191 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 SEC14L3Q9UDX4 400 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 SLC25A13Q9UJS0 675 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 SOBPA7XYQ1 873 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 CTDSP2O14595 271 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 SLC28A2O43868 658 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 ATXN1LP0C7T5 689 aaKnown RBP13.06□□□□□ -0.32
SEC23A-201ENST00000307712 MANFP55145 182 aaKnown RBP13.06□□□□□ -0.32
SEC23A-201ENST00000307712 SNRPD1P62314 119 aaKnown RBP13.06□□□□□ -0.32
SEC23A-201ENST00000307712 RAB41Q5JT25 222 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 IRAK1BP1Q5VVH5 260 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 UXS1Q8NBZ7 420 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 ASZ1Q8WWH4 475 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 TEFMQ96QE5 360 aaKnown RBP13.06□□□□□ -0.32
SEC23A-201ENST00000307712 BOCQ9BWV1 1114 aa13.06□□□□□ -0.32
SEC23A-201ENST00000307712 TCRBV5S2A0A599 114 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 PRR23AA6NEV1 266 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 PAX3P23760 479 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 MYL9P24844 172 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 BUD31P41223 144 aaPredicted RBP13.05□□□□□ -0.32
SEC23A-201ENST00000307712 CLDN8P56748 225 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 PARP16Q8N5Y8 322 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 SLC5A8Q8N695 610 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 GPR150Q8NGU9 434 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 CLCA3PQ9Y6N3 262 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 MROH6A6NGR9 719 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 GKP32189 559 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms