RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ZNF516Q92618 1163 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 FKBP10Q96AY3 582 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 EXOSC8Q96B26 276 aaKnown RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF576Q9H609 170 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 WBP11Q9Y2W2 641 aaKnown RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 IRF2P14316 349 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 CPN2P22792 545 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 PCDH19Q8TAB3 1148 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 C15orf40Q8WUR7 153 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 SP140LQ9H930 580 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 APOBEC3GQ9HC16 384 aaKnown RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 POU2F3Q9UKI9 436 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 WNT6Q9Y6F9 365 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 C2orf74A8MZ97 194 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 NPHS1O60500 1241 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 ADAMTS4O75173 837 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 ITIH1P19827 911 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 PSME3P61289 254 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC7A9P82251 487 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 SPATS1Q496A3 300 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 FAM131AQ6UXB0 335 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 C12orf40Q86WS4 652 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 CEP97Q8IW35 865 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF565Q8N9K5 539 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 ZCCHC10Q8TBK6 192 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 PGAP3Q96FM1 320 aaPredicted RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 NDNQ99608 321 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 PTPN18Q99952 460 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC39A3Q9BRY0 314 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 CFHR5Q9BXR6 569 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 WDR12Q9GZL7 423 aaKnown RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 PRPF19Q9UMS4 504 aaKnown RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 DGKBQ9Y6T7 804 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 PIGBOS1A0A0B4J2F0 54 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 DHRS12A0PJE2 317 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 PRAMEF26H0Y7S4 382 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 SCDO00767 359 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 MUSKO15146 869 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 NAE1Q13564 534 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 HFE2Q6ZVN8 426 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 TBC1D21Q8IYX1 336 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 RNF148Q8N7C7 305 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 POU5F2Q8N7G0 328 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 KXD1Q9BQD3 176 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 RTKNQ9BST9 563 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 PTGES2Q9H7Z7 377 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 PNO1Q9NRX1 252 aaKnown RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 POLR3BQ9NW08 1133 aaPredicted RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 SIRPGQ9P1W8 387 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 B4GALT7Q9UBV7 327 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 CNTN6Q9UQ52 1028 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 TRBV23OR9-2A0A075B6M9 112 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 AGPSO00116 658 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 CCRL2O00421 344 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 WNT7AO00755 349 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 GRID2O43424 1007 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 RNGTTO60942 597 aaKnown RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 IFNA21P01568 189 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 C9P02748 559 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 CXorf57Q6NSI4 855 aaKnown RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 ZBTB10Q96DT7 871 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 TIGARQ9NQ88 270 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF282Q9UDV7 671 aaPredicted RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 ADAMDEC1O15204 470 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 BUD23O43709 281 aaKnown RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 SERPINA6P08185 405 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF3P17036 446 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 HOXB9P17482 250 aaPredicted RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC1A2P43004 574 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF844Q08AG5 666 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 MLC1Q15049 377 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 CDK10Q15131 360 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 LINGO4Q6UY18 593 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 MFSD6LQ8IWD5 586 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 FBXW8Q8N3Y1 598 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 CAMK1GQ96NX5 476 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 XYLT2Q9H1B5 865 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 DKKL1Q9UK85 242 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 BAIAP2Q9UQB8 552 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 FCF1Q9Y324 198 aaKnown RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 PCDHGC4Q9Y5F7 938 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 TET1Q8NFU7 2136 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 SPTBN1Q01082 2364 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 A6NCN8 305 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 K7EPI3 171 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PPEF2O14830 753 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ADAMTS3O15072 1205 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 ITPKAP23677 461 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 CHAF1BQ13112 559 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 SMAD4Q13485 552 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PRKD1Q15139 912 aaPredicted RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 C3orf33Q6P1S2 294 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 PLET1Q6UQ28 207 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 NUDT13Q86X67 352 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 OR52K2Q8NGK3 314 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 CCDC107Q8WV48 283 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 MOAP1Q96BY2 351 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 RPL10LQ96L21 214 aaKnown RBP8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 SMOQ99835 787 aa8.1□□□□□ -1.11
PCDHB1-201ENST00000306549 IFT80Q9P2H3 777 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms