RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 PMF1-BGLAPU3KQ54 211 aa13.17□□□□□ -0.3
BCCIP-202ENST00000299130 DENND4CQ5VZ89 1909 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 PABPN1LA6NDY0 278 aaKnown RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 SOBPA7XYQ1 873 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 TGM5O43548 720 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 KRT20P35900 424 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 BDKRB1P46663 353 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 CREMQ03060 361 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 SRSF11Q05519 484 aaKnown RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 SP140Q13342 867 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 GAB1Q13480 694 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 NAE1Q13564 534 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 KEAP1Q14145 624 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 MAD2L1BPQ15013 274 aaPredicted RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 HKDC1Q2TB90 917 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 MSANTD1Q6ZTZ1 278 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 TSEN54Q7Z6J9 526 aaKnown RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 RASGRP3Q8IV61 690 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 FAM9CQ8IZT9 166 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 PGBD3Q8N328 593 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 ZNF540Q8NDQ6 660 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 SETD9Q8NE22 299 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 C11orf24Q96F05 449 aaPredicted RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 TMEM184CQ9NVA4 438 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 SPATA6Q9NWH7 488 aaPredicted RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 THUMPD1Q9NXG2 353 aaKnown RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 TTC36A6NLP5 189 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 SLC16A5O15375 505 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 WBP4O75554 376 aaKnown RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 JRKO75564 520 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 GCM2O75603 506 aaPredicted RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 NTRK1P04629 796 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 PSMB9P28065 219 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 CCR2P41597 374 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 GSSP48637 474 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 ARHGDIAP52565 204 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 NCS1P62166 190 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 KCNJ10P78508 379 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 DEFB103AP81534 67 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 IFITM3Q01628 133 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 CLCA4Q14CN2 919 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 ACOX1Q15067 660 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 POM121L1PQ3SYA9 428 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 LIPJQ5W064 366 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 GDPD4Q6W3E5 623 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 METTL3Q86U44 580 aaKnown RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 C1orf52Q8N6N3 182 aaKnown RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 ATG16L2Q8NAA4 619 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 OR8J2Q8NGG1 315 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 OR2A12Q8NGT7 310 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 SORCS1Q8WY21 1168 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 RPL3LQ92901 407 aaKnown RBP13.16□□□□□ -0.3
BCCIP-202ENST00000299130 C7orf34Q96L11 122 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 ZNF347Q96SE7 839 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 DUSP26Q9BV47 211 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 CHST8Q9H2A9 424 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 AKIP1Q9NQ31 210 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 PRDM8Q9NQV8 689 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 KRT84Q9NSB2 600 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 SELENONQ9NZV5 590 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 RPS6KA6Q9UK32 745 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 FZD4Q9ULV1 537 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 PCDHB11Q9Y5F2 797 aa13.16□□□□□ -0.3
BCCIP-202ENST00000299130 LAMA3Q16787 3333 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 NEDD8-MDP1E9PL57 170 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 PCDHGA12O60330 932 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 CTSAP10619 480 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 ACPPP15309 386 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 TNFRSF1BP20333 461 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 HNRNPFP52597 415 aaKnown RBP13.15□□□□□ -0.3
BCCIP-202ENST00000299130 CTSCP53634 463 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 AP1S2P56377 157 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 RPP38P78345 283 aaKnown RBP13.15□□□□□ -0.3
BCCIP-202ENST00000299130 KCNC4Q03721 635 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 RELAQ04206 551 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 CSTF3Q12996 717 aaKnown RBP13.15□□□□□ -0.3
BCCIP-202ENST00000299130 RGS21Q2M5E4 152 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.15□□□□□ -0.3
BCCIP-202ENST00000299130 ZNF852Q6ZMS4 543 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 DDX53Q86TM3 631 aaKnown RBP13.15□□□□□ -0.3
BCCIP-202ENST00000299130 GPR156Q8NFN8 814 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 APH1BQ8WW43 257 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 GLMNQ92990 594 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 ZNF689Q96CS4 500 aaPredicted RBP13.15□□□□□ -0.3
BCCIP-202ENST00000299130 RIOK2Q9BVS4 552 aaKnown RBP13.15□□□□□ -0.3
BCCIP-202ENST00000299130 BTBD2Q9BX70 525 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 FAM83DQ9H4H8 585 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 PALMDQ9NP74 551 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 HCFC1R1Q9NWW0 138 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 STOX2Q9P2F5 926 aaPredicted RBP13.15□□□□□ -0.3
BCCIP-202ENST00000299130 TPRKBQ9Y3C4 175 aa13.15□□□□□ -0.3
BCCIP-202ENST00000299130 TRAV19A0A0A6YYK7 116 aa13.14□□□□□ -0.31
BCCIP-202ENST00000299130 C1orf226A1L170 272 aa13.14□□□□□ -0.31
BCCIP-202ENST00000299130 CLDN25C9JDP6 229 aa13.14□□□□□ -0.31
BCCIP-202ENST00000299130 SCAMP2O15127 329 aaKnown RBP13.14□□□□□ -0.31
BCCIP-202ENST00000299130 TSPAN6O43657 245 aa13.14□□□□□ -0.31
BCCIP-202ENST00000299130 FAM20BO75063 409 aa13.14□□□□□ -0.31
BCCIP-202ENST00000299130 SLCO2B1O94956 709 aa13.14□□□□□ -0.31
BCCIP-202ENST00000299130 LCKP06239 509 aa13.14□□□□□ -0.31
BCCIP-202ENST00000299130 BCAP31P51572 246 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms