RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 ZDHHC13Q8IUH4 622 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 DNAJC5GQ8N7S2 189 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 FBXO15Q8NCQ5 510 aaPredicted RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 OR2L2Q8NH16 312 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 DGCR14Q96DF8 476 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 CHFRQ96EP1 664 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 HDAC8Q9BY41 377 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 THAP10Q9P2Z0 257 aaPredicted RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 PADI4Q9UM07 663 aa13.51□□□□□ -0.25
NXF1-201ENST00000294172 TDRKHQ9Y2W6 561 aaKnown RBP13.51□□□□□ -0.25
NXF1-201ENST00000294172 MGAT4DA6NG13 374 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 G3V2T6 193 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 VEGFDO43915 354 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 PRMT3O60678 531 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 RETP07949 1114 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 TRPC1P48995 793 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 ARSFP54793 590 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 TAP2Q03519 686 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
NXF1-201ENST00000294172 PIP5KL1Q5T9C9 394 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.5□□□□□ -0.25
NXF1-201ENST00000294172 MSANTD1Q6ZTZ1 278 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 CHPFQ8IZ52 775 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 HM13Q8TCT9 377 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 SNX19Q92543 992 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 SDCCAG3Q96C92 435 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 REPS1Q96D71 796 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 LINC00615Q96LM1 132 aaPredicted RBP13.5□□□□□ -0.25
NXF1-201ENST00000294172 KXD1Q9BQD3 176 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 DUSP26Q9BV47 211 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 LGR4Q9BXB1 951 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 ZDHHC5Q9C0B5 715 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 DNAJB9Q9UBS3 223 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 GPR34Q9UPC5 381 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 ERVK-11Q9UQG0 969 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 C17orf113A0A1B0GUU1 675 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 GABRR3A8MPY1 467 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 SCAMP2O15127 329 aaKnown RBP13.5□□□□□ -0.25
NXF1-201ENST00000294172 MID1O15344 667 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 SCN2BO60939 215 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 EPN2O95208 641 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 ZNF682O95780 498 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 TGFB1P01137 390 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 ALBP02768 609 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 ACADLP28330 430 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 PNLIPRP1P54315 467 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 PCDH1Q08174 1060 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 VAC14Q08AM6 782 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 PLCL1Q15111 1095 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 LRRC23Q53EV4 343 aaPredicted RBP13.5□□□□□ -0.25
NXF1-201ENST00000294172 SPIN4Q56A73 249 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 CPTPQ5TA50 214 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 FAM46CQ5VWP2 391 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 CES5AQ6NT32 575 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 C11orf96Q7Z7L8 435 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 AMZ2Q86W34 360 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 HS3ST5Q8IZT8 346 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 OR8J2Q8NGG1 315 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 OR5AR1Q8NGP9 310 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 CHTF18Q8WVB6 975 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 C11orf24Q96F05 449 aaPredicted RBP13.5□□□□□ -0.25
NXF1-201ENST00000294172 ACAT2Q9BWD1 397 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 PBX4Q9BYU1 374 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 EPB41L1Q9H4G0 881 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 TRPV4Q9HBA0 871 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 CCDC177Q9NQR7 707 aaPredicted RBP13.5□□□□□ -0.25
NXF1-201ENST00000294172 TM7SF3Q9NS93 570 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 FAM120CQ9NX05 1096 aaKnown RBP13.5□□□□□ -0.25
NXF1-201ENST00000294172 OBP2AQ9NY56 170 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 SH3BP4Q9P0V3 963 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 SLC23A2Q9UGH3 650 aa13.5□□□□□ -0.25
NXF1-201ENST00000294172 CFAP20Q9Y6A4 193 aaKnown RBP13.5□□□□□ -0.25
NXF1-201ENST00000294172 PIPSLA2A3N6 862 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 PCDH7O60245 1069 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 PRSS23O95084 383 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 C1GALT1C1LP0DN25 315 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 ALDH3A2P51648 485 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 CCR3P51677 355 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 FCHO2Q0JRZ9 810 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 DAG1Q14118 895 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 HIST2H2ACQ16777 129 aaPredicted RBP13.49□□□□□ -0.25
NXF1-201ENST00000294172 PAGE2BQ5JRK9 111 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 HIST2H2AA3Q6FI13 130 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 PNCKQ6P2M8 343 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 OR52E4Q8NGH9 312 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 ZFP28Q8NHY6 868 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 SLC5A11Q8WWX8 675 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 RAB7BQ96AH8 199 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 EFCAB11Q9BUY7 163 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 SGPP1Q9BX95 441 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 OR51B5Q9H339 312 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 DPEP2Q9H4A9 486 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 SMURF2Q9HAU4 748 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 CD320Q9NPF0 282 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 ITM2CQ9NQX7 267 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 AASDHPPTQ9NRN7 309 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 CDH7Q9ULB5 785 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 STON1Q9Y6Q2 735 aa13.49□□□□□ -0.25
NXF1-201ENST00000294172 RFXAPO00287 272 aa13.48□□□□□ -0.25
NXF1-201ENST00000294172 VILLO15195 856 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms