RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 ZNF776Q68DI1 518 aaPredicted RBP14.38□□□□□ -0.11
SEC16A-202ENST00000290037 FOXR1Q6PIV2 292 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 MMP2P08253 660 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 CYCSP99999 105 aaKnown RBP14.37□□□□□ -0.11
SEC16A-202ENST00000290037 GPR17Q13304 367 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 QPCTQ16769 361 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 HSD17B12Q53GQ0 312 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 CRB2Q5IJ48 1285 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 KBTBD6Q86V97 674 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 C11orf74Q86VG3 221 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 SGCDQ92629 289 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 CCM2LQ9NUG4 571 aaPredicted RBP14.37□□□□□ -0.11
SEC16A-202ENST00000290037 DPPA5A6NC42 116 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 LILRB3O75022 631 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 UXS1Q8NBZ7 420 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 SUN3Q8TAQ9 357 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 TM6SF2Q9BZW4 377 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 TMEM145Q8NBT3 493 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 DENND6BQ8NEG7 585 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 WDR6Q9NNW5 1121 aaKnown RBP14.37□□□□□ -0.11
SEC16A-202ENST00000290037 ARMC1Q9NVT9 282 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 LINGO3P0C6S8 592 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 TRAM1L1Q8N609 369 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 L3HYPDHQ96EM0 354 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 SLC28A3Q9HAS3 691 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 TYROBPO43914 113 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 ENPP2Q13822 863 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 GPAT4Q86UL3 456 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 GPR150Q8NGU9 434 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.37□□□□□ -0.11
SEC16A-202ENST00000290037 IMP3Q9NV31 184 aaKnown RBP14.37□□□□□ -0.11
SEC16A-202ENST00000290037 MED31Q9Y3C7 131 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 ELOA3DA6NLF2 546 aaPredicted RBP14.37□□□□□ -0.11
SEC16A-202ENST00000290037 PRKD3O94806 890 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 CXCR4P61073 352 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 ELOA3BQ3SY89 546 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 ELOA3Q8NG57 546 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 XAGE5Q8WWM1 108 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 RERGLQ9H628 205 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 ZFP37Q9Y6Q3 630 aaPredicted RBP14.37□□□□□ -0.11
SEC16A-202ENST00000290037 TMEM127O75204 238 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 CLCNKBP51801 687 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 SLC9B2Q86UD5 537 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 SERINC5Q86VE9 423 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 SLC5A11Q8WWX8 675 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 KCNS3Q9BQ31 491 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 UCK2Q9BZX2 261 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 DCSTAMPQ9H295 470 aa14.37□□□□□ -0.11
SEC16A-202ENST00000290037 A0A0J9YVX5 310 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 CCRL2O00421 344 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 MATN1P21941 496 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 CDH12P55289 794 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 PUS10Q3MIT2 529 aaKnown RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 ZNF517Q6ZMY9 492 aaPredicted RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 SLC29A4Q7RTT9 530 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 ZFAND4Q86XD8 727 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 RBM12BQ8IXT5 1001 aaKnown RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 GALNT6Q8NCL4 622 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 B3GNT3Q9Y2A9 372 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 BTBD19C9JJ37 291 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 ZNF623O75123 536 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 DLDP09622 509 aaKnown RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 OXTRP30559 389 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TUBB3Q13509 450 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 ARHGAP19Q14CB8 494 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 RAB30Q15771 203 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 DEFB115Q30KQ5 88 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 ACSBG2Q5FVE4 666 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 THOC6Q86W42 341 aaKnown RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 NAT16Q8N8M0 369 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 PLEKHO2Q8TD55 490 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 C5orf34Q96MH7 638 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 EXO5Q9H790 373 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 SIAEQ9HAT2 523 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 XPNPEP1Q9NQW7 623 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TBC1D3DA0A087WVF3 549 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TBC1D3IA0A087WXS9 549 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TBC1D3EA0A087X179 549 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TBC1D3KA0A087X1G2 549 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TBC1D3FA6NER0 549 aaPredicted RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TBC1D3LB9A6J9 549 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TBC1D3HP0C7X1 549 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 HOXC13P31276 330 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 RORAP35398 523 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 SF3B4Q15427 424 aaKnown RBP eCLIP14.36□□□□□ -0.111e-6■■■■□ 25.8
SEC16A-202ENST00000290037 TBC1D3GQ6DHY5 549 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TBC1D3CQ6IPX1 549 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TBC1D3Q8IZP1 549 aaPredicted RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 GNPDA2Q8TDQ7 276 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 CD36P16671 472 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TARBP2Q15633 366 aaKnown RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 MFSD3Q96ES6 412 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 WASF3Q9UPY6 502 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 DNMT3AQ9Y6K1 912 aaPredicted RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 CAPN5O15484 640 aaPredicted RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 ZBTB11O95625 1053 aaPredicted RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 GPR143P51810 404 aa14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TRA2BP62995 288 aaKnown RBP14.36□□□□□ -0.11
SEC16A-202ENST00000290037 TARDBPQ13148 414 aaKnown RBP eCLIP14.36□□□□□ -0.111e-8■■■■■ 27.7
SEC16A-202ENST00000290037 FASTKD3Q14CZ7 662 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms