RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 WDR37Q9Y2I8 494 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 COL4A3Q01955 1670 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 FEZF1A0PJY2 475 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 PRKD3O94806 890 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 SERPIND1P05546 499 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 PIM1P11309 404 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-201ENST00000279247 GGT1P19440 569 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 CD72P21854 359 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 ACADLP28330 430 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 CHRNB3Q05901 458 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 CAMK2GQ13555 558 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-201ENST00000279247 TMEM196Q5HYL7 178 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 ZCCHC8Q6NZY4 707 aaKnown RBP17.29■□□□□ 0.36
CAPN1-201ENST00000279247 WDR48Q8TAF3 677 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 SLC5A11Q8WWX8 675 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 ELSPBP1Q96BH3 223 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 SPATA6Q9NWH7 488 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-201ENST00000279247 THEGQ9P2T0 379 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 RUVBL1Q9Y265 456 aaKnown RBP17.29■□□□□ 0.36
CAPN1-201ENST00000279247 GPSM3Q9Y4H4 160 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 U3KQV3 271 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 OR52A4PA6NMU1 304 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 H0YIV9 168 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 RTCAO00442 366 aaKnown RBP17.29■□□□□ 0.36
CAPN1-201ENST00000279247 PCDH7O60245 1069 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 BMP2P12643 396 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 PRPS1L1P21108 318 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 MYBPC1Q00872 1141 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 CSTF3Q12996 717 aaKnown RBP17.29■□□□□ 0.36
CAPN1-201ENST00000279247 NKG7Q16617 165 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 PRAMEF14Q5SWL7 426 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 PRAMEF13Q5VWM6 474 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 NETO1Q8TDF5 533 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 UHRF1Q96T88 793 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-201ENST00000279247 S1PR5Q9H228 398 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 CUEDC1Q9NWM3 386 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-201ENST00000279247 ASIC5Q9NY37 505 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 GPR34Q9UPC5 381 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 TMED5Q9Y3A6 229 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 DGKBQ9Y6T7 804 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 PDZK1P1A8MUH7 402 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 ZNF682O95780 498 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 EGFP01133 1207 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 SLC35G4P0C7Q5 338 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 C1GALT1C1LP0DN25 315 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 AQP1P29972 269 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 SMU1Q2TAY7 513 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 FOXB2Q5VYV0 432 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 TBPL2Q6SJ96 375 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 RIMKLAQ8IXN7 391 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 OFCC1Q8IZS5 231 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 HS3ST5Q8IZT8 346 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 FLCNQ8NFG4 579 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 RAD51AP1Q96B01 352 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 DUS3LQ96G46 650 aaKnown RBP17.29■□□□□ 0.36
CAPN1-201ENST00000279247 C12orf66Q96MD2 445 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 KCNH6Q9H252 994 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 KAT8Q9H7Z6 458 aaKnown RBP17.29■□□□□ 0.36
CAPN1-201ENST00000279247 SPASTQ9UBP0 616 aa17.29■□□□□ 0.36
CAPN1-201ENST00000279247 MUC22E2RYF6 1773 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-201ENST00000279247 A0A0G2JN53 185 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 GABRR3A8MPY1 467 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 DENRO43583 198 aaKnown RBP17.28■□□□□ 0.36
CAPN1-201ENST00000279247 UGDHO60701 494 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 KLF8O95600 359 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-201ENST00000279247 DNTTP04053 509 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 HOXB2P14652 356 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 ENGP17813 658 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 KIR2DL1P43626 348 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-201ENST00000279247 CCT8P50990 548 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 CLDN2P57739 230 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 RAE1P78406 368 aaKnown RBP17.28■□□□□ 0.36
CAPN1-201ENST00000279247 FOXD4Q12950 439 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-201ENST00000279247 C16orf72Q14CZ0 275 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 MMP21Q8N119 569 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 MARVELD2Q8N4S9 558 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 NELL1Q92832 810 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 COX14Q96I36 57 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 FERD3LQ96RJ6 166 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 GNGT2O14610 69 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 SERPINA1P01009 418 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 KLK1P06870 262 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 COL9A1P20849 921 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 C5AR1P21730 350 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 KRT33BQ14525 404 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 FAM98BQ52LJ0 330 aaKnown RBP17.28■□□□□ 0.36
CAPN1-201ENST00000279247 ZNF776Q68DI1 518 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-201ENST00000279247 ARMCX6Q7L4S7 300 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 ZNF551Q7Z340 670 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-201ENST00000279247 PDZD3Q86UT5 571 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 MICU2Q8IYU8 434 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 ANKFN1Q8N957 763 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 FAM47BQ8NA70 645 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 ZNF597Q96LX8 424 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 DUSP26Q9BV47 211 aa17.28■□□□□ 0.36
CAPN1-201ENST00000279247 KIAA1549LQ6ZVL6 1849 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 TRBV23OR9-2A0A075B6M9 112 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 H7BY64 318 aa17.27■□□□□ 0.36
CAPN1-201ENST00000279247 ERN1O75460 977 aaKnown RBP17.27■□□□□ 0.36
CAPN1-201ENST00000279247 FAM58BPP0C7Q3 252 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms