RNA–Protein interactions for RNA: ENST00000276410.6

CHRNA6-201, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA6, Length 2,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-201ENST00000276410 IQCCQ4KMZ1 466 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 LRRC73Q5JTD7 316 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 LRRC66Q68CR7 880 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 TSEN54Q7Z6J9 526 aaKnown RBP9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 FAM124AQ86V42 546 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 TSPYL5Q86VY4 417 aaPredicted RBP9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 ZSWIM9Q86XI8 627 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 VRK3Q8IV63 474 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 RBFAQ8N0V3 343 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 PARP16Q8N5Y8 322 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 PIH1D2Q8WWB5 315 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 AUTS2Q8WXX7 1259 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 CTRCQ99895 268 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 BCL7BQ9BQE9 202 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 CHCHD6Q9BRQ6 235 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 REEP1Q9H902 201 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 C14orf119Q9NWQ9 140 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 ASIC5Q9NY37 505 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 CRLS1Q9UJA2 301 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 SNX6Q9UNH7 406 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 PRRC2BQ5JSZ5 2229 aaKnown RBP9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 KCNE1BA0A087WTH5 132 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 RFPL2O75678 378 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 WDR47O94967 919 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 KRT6AP02538 564 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 KRT6BP04259 564 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 NTRK1P04629 796 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 ACRV1P26436 265 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 RRM2P31350 389 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 CASP3P42574 277 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 CTSKP43235 329 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 KIR3DL1P43629 444 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 KRT6CP48668 564 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 IDH2P48735 452 aaKnown RBP9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 WNT3P56703 355 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 CXCR4P61073 352 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 PROX2Q3B8N5 592 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 TPRG1LQ5T0D9 272 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 ADGRF1Q5T601 910 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 UBE2UQ5VVX9 321 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 LHX8Q68G74 356 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 FAHD1Q6P587 224 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 CACTIN-AS1Q8N1I8 211 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 METTL4Q8N3J2 472 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 KIAA1958Q8N8K9 716 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 ATL1Q8WXF7 558 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 NELL1Q92832 810 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 SH3KBP1Q96B97 665 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 HOXD1Q9GZZ0 328 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 ATG10Q9H0Y0 220 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 ZFYVE1Q9HBF4 777 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 TRPM5Q9NZQ8 1165 aa9.62□□□□□ -0.87
CHRNA6-201ENST00000276410 CLDN24A6NM45 220 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 A8MV72 311 aaPredicted RBP9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 TMEM229AB2RXF0 380 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 GFRA2O00451 464 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 AP3D1O14617 1153 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 BNIP3LO60238 219 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 LAMP1P11279 417 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 IL1RNP18510 177 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 CCR7P32248 378 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 HNF1BP35680 557 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 CSKP41240 450 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 OR1E2P47887 323 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 RPIAP49247 311 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 ATN1P54259 1190 aaPredicted RBP9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 ITGA1P56199 1179 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 SMAD3P84022 425 aaKnown RBP9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 ELAVL2Q12926 359 aaKnown RBP9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 FADDQ13158 208 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 PTCHD3Q3KNS1 767 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 SPOUT1Q5T280 376 aaKnown RBP9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 ZNF648Q5T619 568 aaPredicted RBP9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 GDPD3Q7L5L3 318 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 UBTD2Q8WUN7 234 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 FOXJ1Q92949 421 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 MTERF1Q99551 399 aaKnown RBP9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 PITX2Q99697 317 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 TP63Q9H3D4 680 aaPredicted RBP9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 ERVW-1Q9UQF0 538 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 YIPF1Q9Y548 306 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 MAGEB17A8MXT2 336 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 EVPLLA8MZ36 301 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 NUAK1O60285 661 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 SCN2BO60939 215 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 MTX2O75431 263 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 ABCB1P08183 1280 aaPredicted RBP9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 POU2F1P14859 743 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 AMD1P17707 334 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 ITGALP20701 1170 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 KCNJ10P78508 379 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 HSPA14Q0VDF9 509 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 CDC20Q12834 499 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 GAB1Q13480 694 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 CDH18Q13634 790 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 DUOXA1Q1HG43 343 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 PLEKHG6Q3KR16 790 aa9.61□□□□□ -0.87
CHRNA6-201ENST00000276410 SLC8B1Q6J4K2 584 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms