RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TRIM60Q495X7 471 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 SOWAHCQ53LP3 525 aaPredicted RBP12□□□□□ -0.49
CHMP2B-201ENST00000263780 TIGD3Q6B0B8 471 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 PDE12Q6L8Q7 609 aaKnown RBP12□□□□□ -0.49
CHMP2B-201ENST00000263780 RFPL4BQ6ZWI9 263 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 PLCZ1Q86YW0 608 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 VWA5B2Q8N398 1253 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 TPD52L3Q96J77 140 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 PANX1Q96RD7 426 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 BBS2Q9BXC9 721 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 ZNF408Q9H9D4 720 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 RDH14Q9HBH5 336 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 TRIM39Q9HCM9 518 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 C17orf102A2RUQ5 167 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 MEIS3P2A8K0S8 358 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 MAGEB17A8MXT2 336 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 NT5C1B-RDH14C9J2C7 533 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 AP3D1O14617 1153 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 PDE9AO76083 593 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 ALPPP05187 535 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 RPS3P23396 243 aaKnown RBP eCLIP11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 BRCC3P46736 316 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 CDC42P60953 191 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 PCDH1Q08174 1060 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 CACNB2Q08289 660 aaPredicted RBP11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 WDR45BQ5MNZ6 344 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 UTS2BQ765I0 119 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 SLC44A2Q8IWA5 706 aaPredicted RBP11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 OR10G2Q8NGC3 310 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 HCAR2Q8TDS4 363 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 CSGALNACT1Q8TDX6 532 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 SELENOMQ8WWX9 145 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 BHMTQ93088 406 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 TSSK3Q96PN8 268 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 MCCC1Q96RQ3 725 aaPredicted RBP11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 FEVQ99581 238 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 KATNAL1Q9BW62 490 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 ASPNQ9BXN1 380 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 ACPTQ9BZG2 426 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 ZNF226Q9NYT6 803 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 GPRC5BQ9NZH0 403 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 DLGAP4Q9Y2H0 992 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 BOLA1Q9Y3E2 137 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 IQCF5A8MTL0 148 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 A8MV72 311 aaPredicted RBP11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 ANKRD66B4E2M5 251 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 STK16O75716 305 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 HLA-DMAP28067 261 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 IFNA8P32881 189 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 MTAPQ13126 283 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 MED22Q15528 200 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 CDKL4Q5MAI5 379 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 OR4F3Q6IEY1 312 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 ZNF621Q6ZSS3 439 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 ZNF551Q7Z340 670 aaPredicted RBP11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 CCDC28AQ8IWP9 274 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 TCTE3Q8IZS6 198 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 RDH10Q8IZV5 341 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 ZFAND1Q8TCF1 268 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 ASB15Q8WXK1 588 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 UROC1Q96N76 676 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 FRMD6Q96NE9 622 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 HHIPQ96QV1 700 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 PAAF1Q9BRP4 392 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 DOHHQ9BU89 302 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 TRAF4Q9BUZ4 470 aaPredicted RBP11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 APOL5Q9BWW9 433 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 ELOVL6Q9H5J4 265 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 CLN6Q9NWW5 311 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 FAM120CQ9NX05 1096 aaKnown RBP11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 MS4A12Q9NXJ0 267 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 KLHL21Q9UJP4 597 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 PCDHGA2Q9Y5H1 932 aa11.99□□□□□ -0.49
CHMP2B-201ENST00000263780 NPIPB8E9PQR5 432 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 GFRA2O00451 464 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 ICMTO60725 284 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 PRLP01236 227 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 GABRB1P18505 474 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 MYL9P24844 172 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 AFF1P51825 1210 aaKnown RBP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 NUDT6P53370 316 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 CYP4F2P78329 520 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 PPIGQ13427 754 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 NFE2Q16621 373 aaPredicted RBP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 IQCCQ4KMZ1 466 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 CEP78Q5JTW2 689 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 ZNF767PQ75MW2 155 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 ATCAYQ86WG3 371 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 CIR1Q86X95 450 aaPredicted RBP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 PTOV1Q86YD1 416 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 ELMOD2Q8IZ81 293 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 GDPD1Q8N9F7 314 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 UTP15Q8TED0 518 aaKnown RBP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 CIPCQ9C0C6 399 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 SRRQ9GZT4 340 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 MKRN2Q9H000 416 aaKnown RBP11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 NIPAL2Q9H841 368 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 RAD18Q9NS91 495 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 MARCH2Q9P0N8 246 aa11.98□□□□□ -0.49
CHMP2B-201ENST00000263780 SEC14L4Q9UDX3 406 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms