RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 COLEC12Q5KU26 742 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 SPANXN4Q5MJ08 99 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 NANOGNBQ7Z5D8 188 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 GPR88Q9GZN0 384 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 SHPRHQ149N8 1683 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF20P17024 532 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 EDNRAP25101 427 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 ETV3P41162 512 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 OR1E2P47887 323 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 PPP1R3AQ16821 1122 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 SH3D19Q5HYK7 790 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 AGTRAPQ6RW13 159 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 SLC29A4Q7RTT9 530 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 PQLC3Q8N755 202 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 CCDC54Q8NEL0 328 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 ADAD1Q96M93 576 aaKnown RBP18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 C17orf62Q9BQA9 187 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 KAT8Q9H7Z6 458 aaKnown RBP18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 MAP3K8P41279 467 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 TPRG1Q6ZUI0 275 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 TMEM156Q8N614 296 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 MGME1Q9BQP7 344 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 EFCAB11Q9BUY7 163 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 PRORSD1PA6NEY8 169 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 ACADLP28330 430 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 SCN1BQ07699 218 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 NPTX1Q15818 432 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF776Q68DI1 518 aaPredicted RBP18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 P4HA3Q7Z4N8 544 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 TICAM1Q8IUC6 712 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 SORCS1Q8WY21 1168 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 TMEM175Q9BSA9 504 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 USP29Q9HBJ7 922 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 FARSBQ9NSD9 589 aaKnown RBP18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 MARK1Q9P0L2 795 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 SLIT2O94813 1529 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 MAN2A2P49641 1150 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 LASP1Q14847 261 aaKnown RBP18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF542PQ5EBM4 170 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 THEM6Q8WUY1 208 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 ITM2CQ9NQX7 267 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 C8orf4Q9NR00 106 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 TLR4O00206 839 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 SLC35F1Q5T1Q4 408 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 IL21RQ9HBE5 538 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 MAGEE1Q9HCI5 957 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 TEX264Q9Y6I9 313 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 H7BY64 318 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 J3QLW9 94 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 CBFA2T3O75081 653 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF19P17023 458 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 CILP2Q8IUL8 1156 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 THAP3Q8WTV1 239 aaPredicted RBP18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 PRAP1Q96NZ9 151 aa18.16■□□□□ 0.5
SMARCC1-201ENST00000254480 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 LEFTY1O75610 366 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 FCHO2Q0JRZ9 810 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF461Q8TAF7 563 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 LRRC15Q8TF66 581 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 LGR4Q9BXB1 951 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 CYP8B1Q9UNU6 501 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 PEAK1Q9H792 1746 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 NEURL4Q96JN8 1562 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 SCDO00767 359 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 CD2P06729 351 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 AGXTP21549 392 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 HSD11B1P28845 292 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 GMPRP36959 345 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 GPR17Q13304 367 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 SPIN4Q56A73 249 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 CDCA2Q69YH5 1023 aaPredicted RBP18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF554Q86TJ5 538 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 POLE3Q9NRF9 147 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 C9J4A7 227 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 C1orf61Q13536 156 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 FOXRED2Q8IWF2 684 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 AQP11Q8NBQ7 271 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 CAMKVQ8NCB2 501 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 TTLQ8NG68 377 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 ARHGAP39Q9C0H5 1083 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 NID2Q14112 1375 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF3P17036 446 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 DAG1Q14118 895 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 DUOXA1Q1HG43 343 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 LRRC70Q7Z2Q7 622 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 TM9SF2Q99805 663 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 KCNE1P15382 129 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 HOXB6P17509 224 aaKnown RBP18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 NNATQ16517 81 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 TMIGD1Q6UXZ0 262 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 GPRIN1Q7Z2K8 1008 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 PKP2Q99959 881 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 MOCS1Q9NZB8 636 aa18.15■□□□□ 0.5
SMARCC1-201ENST00000254480 DUXAA6NLW8 204 aa18.14■□□□□ 0.5
SMARCC1-201ENST00000254480 TBX10O75333 385 aa18.14■□□□□ 0.5
SMARCC1-201ENST00000254480 F2P00734 622 aa18.14■□□□□ 0.5
SMARCC1-201ENST00000254480 PTX3P26022 381 aaPredicted RBP18.14■□□□□ 0.5
SMARCC1-201ENST00000254480 CDK6Q00534 326 aa18.14■□□□□ 0.5
SMARCC1-201ENST00000254480 RNF130Q86XS8 419 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms