RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 GJB1P08034 283 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 PRPS1L1P21108 318 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 PRKACGP22612 351 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 CERS1P27544 350 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 OR12D2P58182 307 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 SNRPD1P62314 119 aaKnown RBP12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 CAPSQ13938 189 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ATAD3CQ5T2N8 411 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 DESI1Q6ICB0 168 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 DEFB128Q7Z7B8 93 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 ITIH5Q86UX2 942 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 FCAMRQ8WWV6 532 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 PMM1Q92871 262 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 COG8Q96MW5 612 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 THG1LQ9NWX6 298 aaKnown RBP12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 HES2Q9Y543 173 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 NFASCO94856 1347 aa12.82□□□□□ -0.36
PCDHGA3-201ENST00000253812 OR6C65A6NJZ3 312 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 EEF1E1O43324 174 aaKnown RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 ICMTO60725 284 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 CREG1O75629 220 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 RECQL4O94761 1208 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 VLDLRP98155 873 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SP140Q13342 867 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 BATFQ16520 125 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 C10orf62Q5T681 223 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 BAIAP2L2Q6UXY1 529 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC16A9Q7RTY1 509 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 C17orf64Q86WR6 236 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 BEST3Q8N1M1 668 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 OR4K2Q8NGD2 314 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 OR5B17Q8NGF7 314 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 CASTOR1Q8WTX7 329 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 C7orf43Q8WVR3 580 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 MYNNQ9NPC7 610 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 EQTNQ9NQ60 294 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF358Q9NW07 568 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 FLRT1Q9NZU1 646 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 CD300AQ9UGN4 299 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 FBXL3Q9UKT7 428 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 PCYT1BQ9Y5K3 369 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SEPT4O43236 478 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC7A4O43246 635 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 MFSD11O43934 449 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC25A14O95258 325 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SCGB1D2O95969 90 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 H1F0P07305 194 aaKnown RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 GKN3PP0CG01 181 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 MRPS5P82675 430 aaKnown RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 RASGEF1BQ0VAM2 473 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SGCGQ13326 291 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 PMS2P3Q13401 168 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 GANABQ14697 944 aaKnown RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 GPR142Q7Z601 462 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 PSD4Q8NDX1 1056 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 NEIL3Q8TAT5 605 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 DNASE1L2Q92874 299 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 NECAB3Q96P71 396 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 POTEKPQ9BYX7 375 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SYT4Q9H2B2 425 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 GSKIPQ9P0R6 139 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 EXOSC1Q9Y3B2 195 aaKnown RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 CPQQ9Y646 472 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 MYF6P23409 242 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 MAPK3P27361 379 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 RPIAP49247 311 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 CDH11P55287 796 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 BTN1A1Q13410 526 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 ALG10Q5BKT4 473 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 METTL3Q86U44 580 aaKnown RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 ANKFN1Q8N957 763 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC35B2Q8TB61 432 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC22A8Q8TCC7 542 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 AZIN2Q96A70 460 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 FGFBP2Q9BYJ0 223 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SIRPGQ9P1W8 387 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 ERVK-18Q9QC07 812 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 COL14A1Q05707 1796 aaKnown RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 HMX3A6NHT5 357 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 TLX2O43763 284 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 RBBP9O75884 186 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 IL3P08700 152 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 CLUP10909 449 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 CAPN3P20807 821 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 PRKXP51817 358 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 EPHB3P54753 998 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 PRPF38BQ5VTL8 546 aaKnown RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 WDR53Q7Z5U6 358 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 TSPEARQ8WU66 669 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 SYT17Q9BSW7 474 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 CCDC106Q9BWC9 280 aa12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 AGO1Q9UL18 857 aaKnown RBP12.81□□□□□ -0.36
PCDHGA3-201ENST00000253812 TRAPPC13A5PLN9 417 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 TPST2O60704 377 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 MAFO75444 373 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 AXLP30530 894 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 PIK3CBP42338 1070 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 MAP2K4P45985 399 aa12.8□□□□□ -0.36
PCDHGA3-201ENST00000253812 PRR5P85299 388 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms