RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CTF1Q16619 201 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 NKAPLQ5M9Q1 402 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 CELF3Q5SZQ8 465 aaKnown RBP12.52□□□□□ -0.41
VAMP4-201ENST00000236192 TRIM40Q6P9F5 258 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 CNIH2Q6PI25 160 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 BEND4Q6ZU67 534 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 TMEM185AQ8NFB2 350 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 BEST4Q8NFU0 473 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 SGCDQ92629 289 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 CDCA7Q9BWT1 371 aaPredicted RBP12.52□□□□□ -0.41
VAMP4-201ENST00000236192 SLC28A3Q9HAS3 691 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 GATCO43716 136 aaKnown RBP12.52□□□□□ -0.41
VAMP4-201ENST00000236192 OR4F21O95013 312 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 LRATO95237 230 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 CFHP08603 1231 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 CLUP10909 449 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 POLR2IP36954 125 aaKnown RBP12.52□□□□□ -0.41
VAMP4-201ENST00000236192 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.41
VAMP4-201ENST00000236192 C4orf46Q504U0 113 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 FAM209BQ5JX69 171 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 DCST1Q5T197 706 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 MARC1Q5VT66 337 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 LINC00518Q8N0U6 118 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 STK40Q8N2I9 435 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 C11orf65Q8NCR3 313 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 NECTIN4Q96NY8 510 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 OR4K3Q96R72 315 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 MROH8Q9H579 483 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 ELAC1Q9H777 363 aaKnown RBP12.52□□□□□ -0.41
VAMP4-201ENST00000236192 PRMT7Q9NVM4 692 aaPredicted RBP12.52□□□□□ -0.41
VAMP4-201ENST00000236192 CACNG2Q9Y698 323 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 RAB36O95755 333 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 F7P08709 466 aaPredicted RBP12.52□□□□□ -0.41
VAMP4-201ENST00000236192 SPARCP09486 303 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 INHBBP09529 407 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 CLEC2LP0C7M8 214 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 EPB42P16452 691 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 SYN1P17600 705 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 GPR15P49685 360 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 AP1S2P56377 157 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 ACSM2AQ08AH3 577 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 SLAMF1Q13291 335 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 COTL1Q14019 142 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 ACSM2BQ68CK6 577 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 SLC25A25Q6KCM7 469 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 KLHL36Q8N4N3 616 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 GANCQ8TET4 914 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 KIAA1143Q96AT1 154 aaPredicted RBP12.52□□□□□ -0.41
VAMP4-201ENST00000236192 FCRL4Q96PJ5 515 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 NPEPPSL1A6NEC2 478 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 AGTR1P30556 359 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 SSTR4P31391 388 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 MATKP42679 507 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 RAB4BP61018 213 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 EVX2Q03828 476 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 CHAF1BQ13112 559 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF678Q5SXM1 525 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 PRAMEF13Q5VWM6 474 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 PAQR7Q86WK9 346 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 KCNJ9Q92806 393 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 SLCO4A1Q96BD0 722 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 TMED9Q9BVK6 235 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 FNDC11Q9BVV2 318 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 TVP23BQ9NYZ1 205 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 KLK4Q9Y5K2 254 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF432O94892 652 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 DIRAS1O95057 198 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 IFNW1P05000 195 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 GABRB3P28472 473 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 HOXA1P49639 335 aaPredicted RBP12.51□□□□□ -0.41
VAMP4-201ENST00000236192 CLCNKBP51801 687 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 HIST2H2AA3Q6FI13 130 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 OSTM1Q86WC4 334 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 CCDC71Q8IV32 467 aaPredicted RBP12.51□□□□□ -0.41
VAMP4-201ENST00000236192 HSH2DQ96JZ2 352 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 NEDD4LQ96PU5 975 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF768Q9H5H4 540 aaKnown RBP12.51□□□□□ -0.41
VAMP4-201ENST00000236192 GAREM1Q9H706 876 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 GIMAP2Q9UG22 337 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 SULT1C2O00338 296 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 HTR3BO95264 441 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 AHSGP02765 367 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 NOS2P35228 1153 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 MMP12P39900 470 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 DPP6P42658 865 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 RNF212Q495C1 297 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 DNAJB7Q7Z6W7 309 aaPredicted RBP12.51□□□□□ -0.41
VAMP4-201ENST00000236192 GPR156Q8NFN8 814 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 PPP1R13LQ8WUF5 828 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 TMEM185BQ9H7F4 350 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 POM121CA8CG34 1229 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 CREBL2O60519 120 aaPredicted RBP12.51□□□□□ -0.41
VAMP4-201ENST00000236192 FARS2O95363 451 aaKnown RBP12.51□□□□□ -0.41
VAMP4-201ENST00000236192 KLRK1P26718 216 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 MNDAP41218 407 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 ABHD18Q0P651 414 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 ESRP1Q6NXG1 681 aaKnown RBP12.51□□□□□ -0.41
VAMP4-201ENST00000236192 WASH2PQ6VEQ5 465 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 SLC46A3Q7Z3Q1 461 aa12.51□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF615Q8N8J6 731 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms