RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ADGRF1Q5T601 910 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 LINGO2Q7L985 606 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NPAS3Q8IXF0 933 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CENPSQ8N2Z9 138 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NXPE1Q8N323 547 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 GNPDA2Q8TDQ7 276 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 KLHL5Q96PQ7 755 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PIP5K1AQ99755 562 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 C7orf50Q9BRJ6 194 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 ACAT2Q9BWD1 397 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TOR3AQ9H497 397 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 MRPS23Q9Y3D9 190 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 U3KQV3 271 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PROM1O43490 865 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CHRNA1P02708 482 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 XRCC1P18887 633 aaPredicted RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 GADD45AP24522 165 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 RPL10P27635 214 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 DSC2Q02487 901 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NIPAL4Q0D2K0 466 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NAE1Q13564 534 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 RCAN2Q14206 197 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SF1Q15637 639 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 ZNF678Q5SXM1 525 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 IDNKQ5T6J7 187 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NCEH1Q6PIU2 408 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 UNC5DQ6UXZ4 953 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 AMZ2Q86W34 360 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 DENND6BQ8NEG7 585 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TCEAL4Q96EI5 215 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 RBM18Q96H35 190 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 TBATAQ96M53 351 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 GPER1Q99527 375 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 DOHHQ9BU89 302 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 FGFBP2Q9BYJ0 223 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 BCL2L14Q9BZR8 327 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 MAT2BQ9NZL9 334 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 KLHL42Q9P2K6 505 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 LRP5O75197 1615 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NAP1L6A6NFF2 107 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 OR4F21O95013 312 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 IFNA21P01568 189 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 BMP8BP34820 402 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ABCG1P45844 678 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CDH13P55290 713 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 MAXP61244 160 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PPP2R2BQ00005 443 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 RAB39AQ14964 217 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TRAM2Q15035 370 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 VMACQ2NL98 169 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 FIP1L1Q6UN15 594 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 PLEKHG7Q6ZR37 379 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TPGS1Q6ZTW0 290 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 BMP8AQ7Z5Y6 402 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TAC4Q86UU9 113 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CYP4X1Q8N118 509 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SPATA6LQ8N4H0 392 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 METTL25Q8N6Q8 603 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SIDT2Q8NBJ9 832 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 CAMKVQ8NCB2 501 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CANT1Q8WVQ1 401 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 BIRC7Q96CA5 298 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ZC3H10Q96K80 434 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 ACSL5Q9ULC5 683 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 C14orf166Q9Y224 244 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 COL18A1P39060 1754 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 EDDM13A0A1B0GTR0 161 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 BLACEA4D250 179 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TTLL8A6PVC2 850 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NT5C1B-RDH14C9J2C7 533 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 KDELR3O43731 214 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 DLX3O60479 287 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 KRT33AO76009 404 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 GSRP00390 522 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CD48P09326 243 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PDX1P52945 283 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NRG3P56975 720 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 MAPK14Q16539 360 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SLC10A6Q3KNW5 377 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TMEM214Q6NUQ4 689 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 BLOC1S3Q6QNY0 202 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 C3P1Q6ZMU1 363 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ZFAND4Q86XD8 727 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 KIF18BQ86Y91 864 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ZNF440Q8IYI8 595 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 GPR65Q8IYL9 337 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NRSN1Q8IZ57 195 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TOR1AIP2Q8NFQ8 470 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 OR2L5Q8NG80 312 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SLC7A13Q8TCU3 470 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 FCAMRQ8WWV6 532 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 HSH2DQ96JZ2 352 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PKP2Q99959 881 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 EBF4Q9BQW3 602 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ASPNQ9BXN1 380 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 EIF3KQ9UBQ5 218 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 NUP50Q9UKX7 468 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ZFP37Q9Y6Q3 630 aaPredicted RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 A0A0G2JPF8 293 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TEX13CA0A0J9YWL9 993 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms